| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1163 |
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| Symbol | |
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| ID | 7973332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1277714 |
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| End bp | 1279003 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791759 |
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| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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| Protein accession | YP_002943080 |
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| Protein GI | 239814170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
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| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAC TTCTGATTCG CGGCGGGCGC CAGCTCCGCG GCGAGGTACT CATTTCCGGC
GCCAAGAACG CAGCCCTGCC GGAACTGTGC GCCGCGCTCT TGACCGACCA GCCCGTGACG
CTGCACAACG TGCCGCGCCT GCAGGACGTG TCGACCATGC TCAAGCTGGT GCGCAACATG
GGCGTTGCGG CCGAGCGCGA CGACAACGGC ACGGTGCGGC TCGATGCGGG CGACCTCAGC
ATCCCCGAGG CACCCTACGA ACTGGTGAAG ACCATGCGTG CCTCCGTGCT GGCGCTGGGC
CCGCTGCTCG CGCGCTTCGG CCATGCCAAG GTGTCGCTGC CGGGCGGCTG CGCCATCGGC
TCGCGGCCGG TCGACCAGCA CATCAAGGGC CTGCAGGCGA TGGGTGCCGA GATCGTGGTC
GAGCACGGCT ACATGATCGC CAGCCTGCCG GCCGGGCGCA CCCGCCTGAA GGGCGCGCGC
ATCCTGACCG ACATGGTCAC CGTCACCGGC ACCGAGAACT TCCTCATGGC CGCCGCGCTG
GCCGAGGGCG AGACGCTGCT CGAGAACGCC GCGCAGGAGC CCGAGATCGT CGACCTGGCC
GAAATGCTGA TCCGCATGGG CGCGAGGATC GAAGGCCACG GCACCAGCCA CATCCGCATC
CAGGGTGTCG AGAAGCTGCA CGGCTGCGAG CACGCCGTGG TGGCCGACCG CATCGAGGCC
GGCACCTTCC TGTGCGCCGT TGCGGCCACC GGCGGCGACG TGTTCCTGCG CCACGCGCGG
GCCGACCACA TGGACGCGGT GATCGACAAG CTGCGCGACG CCGGCTGCAC CGTCGCGGCA
CAGGAGGGCG GCGTGCGCAT CAGCTCCAGC GCCCCGGCCT GCGAGCACCT CAAGGCGCAG
AGCTTCAGCA CCACCGAATA CCCCGGTTTC CCGACCGACA TGCAGGCCCA GTTCATGGCC
CTGAACGTGA TCGCGCGCGG CGCCTCGATG GTCACCGAAA CCATCTTCGA GAACCGCTTC
ATGCACGTGA ACGAGATGGT GCGCCTGGGC GCCACGATCC ACGTCGAGGG CAAGGTGGCG
ATGGTCGAGG GCGTGCAGCA GCTGTCGGGC GCCACCGTGA TGGCGACCGA CCTGCGCGCC
TCGGCCAGCC TGGTGATCGC CGGCCTCGTG GCCGATGGCG AGACGCTGGT CGACCGCATC
TACCACCTGG ACCGCGGCTA CGACCGCATG GAAGCCAAGC TGCGCGGCCT GGGCGCGGAC
ATCGAACGCA TCTCGGGAGC CGCCGCATGA
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| Protein sequence | MDKLLIRGGR QLRGEVLISG AKNAALPELC AALLTDQPVT LHNVPRLQDV STMLKLVRNM
GVAAERDDNG TVRLDAGDLS IPEAPYELVK TMRASVLALG PLLARFGHAK VSLPGGCAIG
SRPVDQHIKG LQAMGAEIVV EHGYMIASLP AGRTRLKGAR ILTDMVTVTG TENFLMAAAL
AEGETLLENA AQEPEIVDLA EMLIRMGARI EGHGTSHIRI QGVEKLHGCE HAVVADRIEA
GTFLCAVAAT GGDVFLRHAR ADHMDAVIDK LRDAGCTVAA QEGGVRISSS APACEHLKAQ
SFSTTEYPGF PTDMQAQFMA LNVIARGASM VTETIFENRF MHVNEMVRLG ATIHVEGKVA
MVEGVQQLSG ATVMATDLRA SASLVIAGLV ADGETLVDRI YHLDRGYDRM EAKLRGLGAD
IERISGAAA
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