| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1160 |
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| Symbol | |
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| ID | 7973329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1275620 |
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| End bp | 1276567 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791756 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943077 |
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| Protein GI | 239814167 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCGA TCTCATTCCA ATCGGTCTCC AAGACCTACC CTCCCTCCAG ACAGCAGCGG
GCCCAAGGCA AGCAGGGGCT GCGCGCCGTC GACGAGGTCA GCTTCCAGAT CGAGCCGGGC
GAGTTCTTCG GCCTGCTCGG GCCCAACGGC GCGGGCAAGA CCACGCTCAT CAGCATGCTG
GCCGGCCTGT CCCGCCCCAC GGCCGGCGCC ATCAGCGTCC ATGGCTTCGA CGTGCAGCGC
GACTATGCCG AGGCCCGGCG CCAGCTCGGC ATCGTGCCTC AGGAGCTGGT GTTCGACCCG
TTCTTCAACG TGCGCGAATC GCTGCGCATC CAGTCGGGCT ACTTCGGCAT CAAGAACAAC
GAGGCCTGGA TCGACGAGCT GCTGCAAAGC CTGGGCCTGG CCGACAAGGC CACGGCCAAC
ATGCGCCAGC TCTCGGGCGG CATGAAGCGC CGGGTGCTGG TGGCACAGGC GCTGGTGCAC
AAGCCACCCG TGATCGTGCT GGACGAGCCC ACCGCCGGGG TCGACGTCGA ATTGCGCCAG
ACGCTCTGGC AGTTCGTCGC CAGGCTCAAC AAGGAGGGCA GCACCGTGCT GCTCACCACC
CACTACCTCG AAGAGGCCGA GGCGCTGTGC AGCCGCATCG CGATGCTCAA GCTCGGCAAG
GTGATCGCCC TGGACCGCAC CAGCGAGCTC CTGAAGTCGG CCGCCAGCAA CGTGCTGCGC
TTCAAGACCG ACGCCATGCT GCCGTGGGCC ATTGCGCAGC ATGCGCGCAT CACCGGGCGC
ATCGTGCAGC TGCCGGCGCA GAACGCCCAT GAAGTCGAAC AACTGCTGGC CGCGATCCGC
GAAGCCGGCG TCGCGGTGGA AGACGTGGAA ATGCGCAAGG CCGACCTGGA AGACGTGTTC
ATCGACCTGA TGGCAGGCGA GCAGACGCCG CTGGAGGTGG CGAGATGA
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| Protein sequence | MPAISFQSVS KTYPPSRQQR AQGKQGLRAV DEVSFQIEPG EFFGLLGPNG AGKTTLISML
AGLSRPTAGA ISVHGFDVQR DYAEARRQLG IVPQELVFDP FFNVRESLRI QSGYFGIKNN
EAWIDELLQS LGLADKATAN MRQLSGGMKR RVLVAQALVH KPPVIVLDEP TAGVDVELRQ
TLWQFVARLN KEGSTVLLTT HYLEEAEALC SRIAMLKLGK VIALDRTSEL LKSAASNVLR
FKTDAMLPWA IAQHARITGR IVQLPAQNAH EVEQLLAAIR EAGVAVEDVE MRKADLEDVF
IDLMAGEQTP LEVAR
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