| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1158 |
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| Symbol | |
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| ID | 7973327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1274596 |
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| End bp | 1275255 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791754 |
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| Product | toluene tolerance family protein |
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| Protein accession | YP_002943075 |
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| Protein GI | 239814165 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.246193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA AGATCTTGCA ACGACGCGGC TTCGGCCGCC TGGTGCTGGC CAGTGCCTTG
CTTTTCGGTG CCGCGACGGC TTTCGTGCGC CCGGCCCATG CCGCCGACGA GGCGCCCGAT
GCGCTCGTCA AGCGCCTGTC GACCGATGTG CTCGAGACCA TCAAGGCCGA CACCTCCATC
AAGGCTGGCG ACATCAACAA GATCATGGTG CTGGTCGACA GCAAGATCAT GCCCAACGTC
AACTTCCAGC GCATGACGGC TTCCGCCGTC GGCCCGGCCT GGCGCCAGGC CACGCCCGAG
CAGCAGAAGA AGCTGCAGGA AGAATTCAAG ACCCTGCTGG TGCGCACCTA CGCCGGCGCG
CTCGACCAGG TGAGCGACCA GACGGTCACG GTGCGCCCGT TCCGCGGCTC GCCTGAAGAC
ACCGACGTGC TGGTGCGTAC CGAGGTCAAG GGCCGCGGCG ATCCGGTGCA GCTCGACTAC
CGGCTCGAGA AAACGCCCGG CCAGGGCGGC GGCTGGAAGG TCTACAACCT CAATGTGCTG
GGTGTCTGGC TGGTCGACAC CTACCGCACC CAGTTCGCGC AGGAAATCAA CGCGCGCGGC
ATCGACGGCC TGATTGCGGC GCTGGCGGCG CGCAACAAGG GCAACAACGG CAAGAGCTGA
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| Protein sequence | MNNKILQRRG FGRLVLASAL LFGAATAFVR PAHAADEAPD ALVKRLSTDV LETIKADTSI
KAGDINKIMV LVDSKIMPNV NFQRMTASAV GPAWRQATPE QQKKLQEEFK TLLVRTYAGA
LDQVSDQTVT VRPFRGSPED TDVLVRTEVK GRGDPVQLDY RLEKTPGQGG GWKVYNLNVL
GVWLVDTYRT QFAQEINARG IDGLIAALAA RNKGNNGKS
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