| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1157 |
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| Symbol | |
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| ID | 7973326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1273666 |
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| End bp | 1274412 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791753 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_002943074 |
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| Protein GI | 239814164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.137012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACAG CCCTTTCCCC GTCTTTTGCT ATCAACAAGA TAGCAAACCA TGCCCGCTGG
GCCAGTGTTG CCGTCGCCCT CGCACTCATT GCGGGCTGCG CGAGCGGGCC CCACGCCAAT
CCGGCCGACC CTTTCGAGCC GTTCAACCGG GGCGTCACGC GCTTCAACGA CACGGTCGAC
GAGGCCGTGC TCGTGCCCGT GGCCACCGCC TACCAGCGTG TGCTGCCCTC GATGGTGCGC
ACTGGGGTGG GCAATTTCTT CGGCAACCTG GGCGATGTCT GGAGCTTCGT CAACAGCGTG
GCCCAGCTCA AGCTGCAGAA CAGCGCCGAG ACCTTCATGC GGGTCAACGT CAACACCTTC
TTCGGCCTGG GCGGCTTGCT GGACATTGCC ACCGAGGCGG GCATCGACCG CCACGAGGAG
GACTTCGGCC AGACGCTCGG CCGCTGGGGC GTGGGCGCCG GCCCGTACGT GGTGCTGCCG
GTGTTCGGCC CGTCGACCCT GCGCGACACG GCCGCCTTGC CGGTCGACCG TGCCGGCAGC
GTGCTCGGCA ACATGAACGA CGTGGCCTGG CGCAATTCGC TGTCGGTCCT GGAGGCCGTC
GATACGCGGG CGAGGTACCT GCGCGCCGGC CGCCTGCTCG ACGATGCGGC ACTCGACAAG
TACACCTTCA CGCGCGACGC CTTCCTGCAG CACCGCCGCA ACGACGTCTA CGACGGCAAT
CCGCCTGACG ACGAGGGCGG GAAATAA
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| Protein sequence | MKTALSPSFA INKIANHARW ASVAVALALI AGCASGPHAN PADPFEPFNR GVTRFNDTVD
EAVLVPVATA YQRVLPSMVR TGVGNFFGNL GDVWSFVNSV AQLKLQNSAE TFMRVNVNTF
FGLGGLLDIA TEAGIDRHEE DFGQTLGRWG VGAGPYVVLP VFGPSTLRDT AALPVDRAGS
VLGNMNDVAW RNSLSVLEAV DTRARYLRAG RLLDDAALDK YTFTRDAFLQ HRRNDVYDGN
PPDDEGGK
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