| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1156 |
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| Symbol | |
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| ID | 7973325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1273178 |
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| End bp | 1273669 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644791752 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_002943073 |
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| Protein GI | 239814163 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.482142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTT CCAACAACGA CATCTGGGTC GGCCTGTTCG TGCTGATCGG CGGCGCGGCG
CTGCTGTTCC TCGCGCTGCA GTCGGCCAAC CTGCTGAGCC TGAACTTCCA GAAGACCTAC
AACGTCACCG CGCGTTTCGA CAACATCGGC GGGCTCAAGC CGCAAACGGC GGTCAAGAGC
GCGGGCGTGG TGGTCGGCCG CGTGGAGTCC ATCTCGTTCG ACGACAAGTC TTTTCAGGCC
AGCGTCACAC TGGCATTGCA AAACCGTTAC AGTTTTCCCA AGGACAGTTC GCTCAAGATC
CTGACCAGTG GCCTGCTCGG CGAGCAGTAC ATCGGGATCG AGGCGGGCGC CGAGGAGAAG
AACCTGCAAG CCGGCGACAC CGTCACCTCG ACCCAATCGG CCGTGGTGCT GGAAAACCTG
ATCAGCCAGT TCCTCTACAG CAAGGCGGCC GAAGGAAATA CTTCGACGCC GGGAACAGCC
AACAAGAAAT GA
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| Protein sequence | MQRSNNDIWV GLFVLIGGAA LLFLALQSAN LLSLNFQKTY NVTARFDNIG GLKPQTAVKS
AGVVVGRVES ISFDDKSFQA SVTLALQNRY SFPKDSSLKI LTSGLLGEQY IGIEAGAEEK
NLQAGDTVTS TQSAVVLENL ISQFLYSKAA EGNTSTPGTA NKK
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