| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1146 |
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| Symbol | aroB |
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| ID | 7973315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1258981 |
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| End bp | 1260093 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791742 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002943063 |
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| Protein GI | 239814153 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTGC CCGCACCTTC CGCACCGCCA GAACGCGTCG ACATCCAGCT CGGCGAACGC
AGCTACCCGA TCCTGATCGG CACCGGCCTG CTGGACGACC CCCAGAGCTT CGCCGCCGTG
CCCGCGGCCG CCAGCGCGCT GGTCGTCAGC AACACCACCG TGGCGCCGCT CTACGCCAAG
GCCCTGCGCC AGGCGCTGGC CGGGCGCTTT CGCACGGTCC ACCTGCTCGA GCTGCCCGAC
GGCGAGGTGC ACAAGAACCT TGAGACCCTG AACCTGATCT TCGATGCGCT GCTCGGCCAC
GGCAGCGACC GCAAGACCGT GCTGTTTGCG CTGGGCGGCG GCGTGGTGGG CGACATGACC
GGCTTTGCCG CCGCGAGCTA CATGCGCGGC GTGCCCTTTG TGCAGGTGCC GACCACGCTG
CTGGCGCAGG TCGATTCGTC GGTCGGCGGC AAGACCGCCA TCAACCATCC GCTCGGCAAG
AACATGATCG GCGCCTTCTA CCAGCCGCAG CTCGTGGTGT GCGACCTGGC TACGCTGCAG
ACGCTGCCGC CGCGCGAACT CAGCGCGGGC CTGGCCGAGG TCATCAAGTA CGGCCCGATC
CACGACATGG CCTTCTTCGA CTGGATCGAG GCGAATGTCG ACGCGCTGGT GGCACGCGAG
CCGGCCGCGC TGGCCCATGC GGTCAAGCGC AGCTGCGAGA TCAAGGCGCT GGTCGTCGGC
CAGGACGAGC GCGAGACCGG CCTGCGGGCC ATCCTCAATT TCGGCCACAC CTTCGGCCAT
GCGATCGAGT CGGGCCTGGG CTACGGCGAG TGGCTGCATG GCGAAGCGGT CGGCTGCGGC
ATGGTGATGG CGGCGCACCT GTCGCAGCGG CTCGGCGGCG TCGATGCAGC GTTCGTCGAA
CGGCTCACGC GGCTGATCGA GCGCGCCGGC CTGCCGACCA CCGGCCCCGC GCTGGGCGCG
GACCGGTACC TCGAACTGAT GCGGGTCGAC AAGAAATCCG AGGCGGGTGA AATCCGTTTC
GTGGTGATCG ACAAGCCGGG CTCCGCCGCC GTCAGCAGCG CGCCCGATGC GCTGGTGCGC
GAAGTGCTCG CGCGCTGCTG CCAGGCCGAA TGA
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| Protein sequence | MPLPAPSAPP ERVDIQLGER SYPILIGTGL LDDPQSFAAV PAAASALVVS NTTVAPLYAK
ALRQALAGRF RTVHLLELPD GEVHKNLETL NLIFDALLGH GSDRKTVLFA LGGGVVGDMT
GFAAASYMRG VPFVQVPTTL LAQVDSSVGG KTAINHPLGK NMIGAFYQPQ LVVCDLATLQ
TLPPRELSAG LAEVIKYGPI HDMAFFDWIE ANVDALVARE PAALAHAVKR SCEIKALVVG
QDERETGLRA ILNFGHTFGH AIESGLGYGE WLHGEAVGCG MVMAAHLSQR LGGVDAAFVE
RLTRLIERAG LPTTGPALGA DRYLELMRVD KKSEAGEIRF VVIDKPGSAA VSSAPDALVR
EVLARCCQAE
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