| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1143 |
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| Symbol | |
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| ID | 7973312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1255693 |
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| End bp | 1256235 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791739 |
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| Product | Pilus assembly protein PilP |
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| Protein accession | YP_002943060 |
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| Protein GI | 239814150 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGACCA CCGCCAACCT CCTGTGGCTG GTCGCGGCCG CCCTGGGCCT GAGCGCCTGC
GCCGATTCGG AGCAGGAAGA CCTGCGCCGC TGGATGGTCG AGCAGCGCGC CCAGGTCAAG
CCCACGGTGC CGCCGATCAC GGAACCCAAG AAATTCACCC CCCAGGCCTA CACCGAGGGC
GCGGCATTCG AGCCGTTCAA CCTGCTGAAG CTGACCCAGG CGCTGCGCCG GGAATCGAAC
CAGCCCAGCA CGTCGGAGCT GATCGCACCC GAGCTGGTGC GCCGCAAGGA AGCGCTCGAA
GCCTTCCCGC TCGACTCCAT GGCCATGGTG GGCAGCATGA ACCGCAACGG CCAGCCGGTG
GCGCTGGTTC GTGTCGACAA GCTGCTCTAC AAGGTGCGGG TCGGCGAATA CCTGGGCCTC
AACTACGGGC GCATTACCCG TATCAACGAA ACCGAAATCG CCCTGCGTGA AATCGTGCAG
GACGCCGCCG GTGAATGGAT CGAACGCGTG GCGACATTGC AGCTGCAAGA GAGTGCGAAA
TGA
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| Protein sequence | MRTTANLLWL VAAALGLSAC ADSEQEDLRR WMVEQRAQVK PTVPPITEPK KFTPQAYTEG
AAFEPFNLLK LTQALRRESN QPSTSELIAP ELVRRKEALE AFPLDSMAMV GSMNRNGQPV
ALVRVDKLLY KVRVGEYLGL NYGRITRINE TEIALREIVQ DAAGEWIERV ATLQLQESAK
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