| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1130 |
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| Symbol | engB |
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| ID | 7969652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1241811 |
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| End bp | 1242554 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791726 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_002943047 |
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| Protein GI | 239814137 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCC CGTCGCGCAA GCACGCCGCT CCCCCTTCCC GCGCGACCCC TGCCGTGGAC
CCCGTTGCCG CCGAGCGCGA GCGCATCGCG CTCGGCTGGC TGCACACGGC GCACTTCCTC
ACCAGCGCCC CGCAGCTGGA GCATCTGCCC CCGCTCGACC TGCCCGAAAT CGCCTTCGTC
GGCCGCTCGA ACGCGGGTAA ATCGACCGCA ATCAACACGC TCACCCAGCA GACGCGCCTG
GCCTTCGCTT CCAAGACGCC GGGCCGCACG CAGCACATCA ACCTGTTCGG CGTCGGCAAG
CAGAAGGCCG ACGACGCCGT GCTGGCCGAC CTGCCCGGCT ACGGCTATGC GGCGGTTCCC
AAGGAAGCCA AGCTGCGCTG GCAGCGCGTC ATGGGCAACT ACCTGATGAC GCGCGAGAAC
CTGCGCGGCG TGGTGCTGAT GTGCGACCCG CGCCACGGCA TGACCGAGCT CGACGAGATC
CTGCTCGACG TGATCCGTCC GCGCGTGGAA CAGGGGCTCA AGTTCCTCGT GCTGCTGACC
AAGGCCGACA AGCTCACGCG CAGCGAGGGC GCCAAGGTGC TGTCCATTAC GCGACTGCAG
GCCGGCGGCG GCGAGGTCAA ACTGTTCTCC GCCCTCAAGA AACAGGGCGT GGGGGAGGCC
GCCGAGCTGC TGTGGCGCTG GGCGCATCCG CCCGGGGAAG AAAAGCCGGA GGCGGCCCCT
CCGGCCGCGC CGCAAGACAC CTAG
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| Protein sequence | MITPSRKHAA PPSRATPAVD PVAAERERIA LGWLHTAHFL TSAPQLEHLP PLDLPEIAFV
GRSNAGKSTA INTLTQQTRL AFASKTPGRT QHINLFGVGK QKADDAVLAD LPGYGYAAVP
KEAKLRWQRV MGNYLMTREN LRGVVLMCDP RHGMTELDEI LLDVIRPRVE QGLKFLVLLT
KADKLTRSEG AKVLSITRLQ AGGGEVKLFS ALKKQGVGEA AELLWRWAHP PGEEKPEAAP
PAAPQDT
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