| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1128 |
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| Symbol | |
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| ID | 7969650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1239926 |
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| End bp | 1240810 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791724 |
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| Product | lipid A biosynthesis acyltransferase |
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| Protein accession | YP_002943045 |
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| Protein GI | 239814135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCG GTTCCCGGCT CGGCATCGCT TTCATGCGCG CGATCGCGCC GCTGCCGCTG
CCGCTGGTGC GCGGTTTCGG CGCGCTGCTC GGACGCGTGC TGCACACCAT CGCCTTGCCG
CGGCGACGCG TGGTCGACAC CAACCTGGCG GTGTGCTTTC CCGGCAAATC CGAAGCCGAA
CGCCGCCGCA TCGCGCGCGA GACCTTCGTG TACGTGGCGC AGTCCTGGCT CGACCGCAGC
TGGCTCTGGC ACGCACCCGA AAAGGTGGTG GCCAGCCGGC TCAAGGTGGT GGGCGCGGCG
GCGGAGATCC GCGAGATTGC CGATGGCGAC GAGCCGATGA TCCTGTTCGC GCCGCATTTC
TACGGCCTCG ATGCCGCGGC CACGGCGCTG ACCATGCACA CGGCAAGGCC CTCGGCCACC
ATCTACACGA CCCAGCGCGA TCCGATGGTC GACGCATGGA TCCGCGAAGG CCGCACGCGC
TTCGGCAACG TGGCGGCGCT CAACCGCGTC GACGGCATCA AGCCGGTGCT CGCAGGCCTG
CGCAAGGGCG GCCTCCTGTA CCTGCTGCCC GACATGGACT TCGGCCGCGA CCAGACCATC
TTCGTGCCGT TCTACGGCGT GCAGGCGGCC ACGGTGCCCT CGCTCTCGCG CTTTGCGCGG
CTGGGCAAGG CGAAGGTGGT GCCGGTGGTC GCGAGGCTCA CGCCTGGCGG CTACGAGATC
GAAGTGCGGC CGGCCTGGCA GAACTTCCCG ACCGACGACG TTGAGGCCGA CACGGCGCTC
ATGAACCAGC GGCTGCAGGG CTACATCGAC ACGATGCCTT CGCAGTACTA CTGGGTGCAC
CGCCGCTTCA AGACGCGGCC TGAAGGCGCG CCGCCGGTCT ATTGA
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| Protein sequence | MSLGSRLGIA FMRAIAPLPL PLVRGFGALL GRVLHTIALP RRRVVDTNLA VCFPGKSEAE
RRRIARETFV YVAQSWLDRS WLWHAPEKVV ASRLKVVGAA AEIREIADGD EPMILFAPHF
YGLDAAATAL TMHTARPSAT IYTTQRDPMV DAWIREGRTR FGNVAALNRV DGIKPVLAGL
RKGGLLYLLP DMDFGRDQTI FVPFYGVQAA TVPSLSRFAR LGKAKVVPVV ARLTPGGYEI
EVRPAWQNFP TDDVEADTAL MNQRLQGYID TMPSQYYWVH RRFKTRPEGA PPVY
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