| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1127 |
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| Symbol | |
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| ID | 7969649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1239033 |
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| End bp | 1239929 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791723 |
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| Product | lipid A biosynthesis acyltransferase |
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| Protein accession | YP_002943044 |
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| Protein GI | 239814134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACCC TGTTCCGCCT GCTTGCCCGC GTACCGATGC CCGTGATGCA TCGGCTCGGC
GCGCTCTTGG GCTGGATCGT CTGGTATTGC GCGCCGGACT ACCGCCGCCG CTTCAAGGCC
AATGCCGAGA GTGCCGGATT CACCCCCGGG CAGTACCGCC CCGCCATCGC GGCCGCCGGC
CAGATGGCTG CCGAGCTGCC CTGGCTGTGG CTGCGTCCGC AGGGCGAGAG CGTGCTGCGG
CGCGTGGTGC GCTGGGAAGG CGTGGAGGCC TTCGAGGCCG CCATGCGGGA GAAGAAGGGC
GTGATCCTCG TGGCGCCGCA CCTGGGCAGC TGGGAGATGT GCGGCCAGGC GATCGGCGAG
CGCTTTCTCG AGACCTTCGG GCCGATCACC GCGCTGTTCC GCCCCGCGCG CAAGAAATGG
ATGGCCGAGC TCATCGCCGC CGGCTCGCGC GACCGGCCCG GCCTGCAGAC GCTGCCCACC
AACAACACCG GCGTGCGCGG CCTCATCCGC ACGCTGCGCA GCGGCGGCTA CACCGGCATC
CTGCCCGACC AGGTGCCGCC GCTCGGGCAG GGCGTGTGGG CGCCCTTTCT CGGCCGGCCG
GCCTACACCA TGACGCTGCT GCCGCGGCTC GCGCAGCAGA CCGGCGCCGC CTGTTTCCTG
AGCGTGTGCG AAAGGCTGCC GCGCGGCGCG GGCTACGTGA TCCGCTTCGA GCCGATCGTG
GGCACGCCGC TCACCGATCC GGCCGCGCCC ATCGAGGCCG CGGCGGCCGC CATGAACGAC
GCCATCGGGC GCCTGATCCA CAGCCTGCCG GGGCAGTACG TGTGGGACTA CGCGCGCTAC
AAGGAGCCGC GCGGCGAAAC CGCGGTGGCG GCCCAGCCCG GGGAGCAGGC ACGATGA
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| Protein sequence | MVTLFRLLAR VPMPVMHRLG ALLGWIVWYC APDYRRRFKA NAESAGFTPG QYRPAIAAAG
QMAAELPWLW LRPQGESVLR RVVRWEGVEA FEAAMREKKG VILVAPHLGS WEMCGQAIGE
RFLETFGPIT ALFRPARKKW MAELIAAGSR DRPGLQTLPT NNTGVRGLIR TLRSGGYTGI
LPDQVPPLGQ GVWAPFLGRP AYTMTLLPRL AQQTGAACFL SVCERLPRGA GYVIRFEPIV
GTPLTDPAAP IEAAAAAMND AIGRLIHSLP GQYVWDYARY KEPRGETAVA AQPGEQAR
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