Gene Vapar_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1119 
Symbol 
ID7969641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1227464 
End bp1227754 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content61% 
IMG OID644791715 
Productchaperonin Cpn10 
Protein accessionYP_002943036 
Protein GI239814126 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTC GTCCTTTGGC CGATCGCGTG ATCGTCAAGC GTGTTGACAG CGAAACCAAG 
ACCGCCTCTG GCATCGTCAT CCCCGACGCA GCCGCCGAAA AGCCCGATCA GGGTGAAGTC
CTGGCCGTCG GCCCCGGCAA GCGCACCGAA AAGGGCGACC TGACCGCACT GACCGTCAAG
GTCGGCGACC GCGTCCTGTT CGGCAAGTAC AGCGGCCAGA CCGTCAAGGT CGATGGCGAC
GAACTGCTGG TCATGAAGGA AGACGACCTC TTTGCCGTGG TCGAGAAGTA A
 
Protein sequence
MKLRPLADRV IVKRVDSETK TASGIVIPDA AAEKPDQGEV LAVGPGKRTE KGDLTALTVK 
VGDRVLFGKY SGQTVKVDGD ELLVMKEDDL FAVVEK