| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1111 |
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| Symbol | |
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| ID | 7969633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1217928 |
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| End bp | 1218965 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791707 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943028 |
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| Protein GI | 239814118 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTACC TGCAACTCAA AGACATCAAG AAGAGCTTCG GCGACGTCGA CATCATCAAG
GGCGTCGACC TCGAGATCCA GAAGGGCGAG TTCATCGTCT TCGTCGGTCC TTCGGGCTGC
GGCAAGTCGA CGCTGCTGCG CCTCATTGCG GGGCTCGAGC CGATCACCAG CGGCAAGTTG
CTGCTCGACG GCAAGGACAT CACCTGGGCG CCTTCGGGCA AGCGCGACCT GGCGATGGTG
TTCCAGAGCT ATGCGCTCTA TCCGCACATG AGCGTGTACG ACAACATGTC CTTCGCGCTC
AAGCTCGCGG GCGTGCCCAA GGACGAGATC AAGACCAAGG TGGAGTACGC GGCGAAGACG
CTCAACCTCA CGCAGTACCT CGACCGCACG CCTAAGGACC TGTCGGGCGG CCAGCGCCAG
CGCGTGGCCA TCGGCCGCGC GATCGTTCGC GCGCCCAAGG TGTTCCTGTT CGACGAGCCG
CTGTCCAACC TGGATGCGGC GCTGCGCGGC AACACGCGCG TCGAGATCCA CAAGCTGCAC
CGCTCGCTCG GCGCCACCAC CATCTACGTG ACGCACGACC AGGTCGAGGC CATGACGCTG
GCCGACCGCG TGGTGGTGCT CAGGGACGGG CTCATCGAGC AGGTCGGCAC GCCGCTCGAG
CTGTACGACC ACCCGGCCAA CCAGTTCGTC GCGCAGTTCA TCGGCATGCC GTCGATGAAC
ATGGTGGCGG CAAGCGCCAT TCCGAGTTTT TCCGCCGCCA CCGGCGGTCG CCTGCCGAGC
GACGGCTTCC TGGGCGTGCG GCCCGAAGGC CTGCGCGTGC ATCCGAAGCA GGCTGCGCCC
GCGGGCGTGC CGGGGCGCGT GGAGCTGATC GAGGCGCTGG GCGCCGACAC GCTGATCCAC
GTCGACGTGG GCGGCGTGCC GCTGATCGCG CGCCAGAACG AGCGCACGCC GCTGCATGCA
GGCGACGACG TGGCGGTCGA GCTCGATCCG TCGGTGCTTC ATTTGTTCAA CCGCGAAGGC
CGCTCGGTCT CCGCCTGA
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| Protein sequence | MAYLQLKDIK KSFGDVDIIK GVDLEIQKGE FIVFVGPSGC GKSTLLRLIA GLEPITSGKL
LLDGKDITWA PSGKRDLAMV FQSYALYPHM SVYDNMSFAL KLAGVPKDEI KTKVEYAAKT
LNLTQYLDRT PKDLSGGQRQ RVAIGRAIVR APKVFLFDEP LSNLDAALRG NTRVEIHKLH
RSLGATTIYV THDQVEAMTL ADRVVVLRDG LIEQVGTPLE LYDHPANQFV AQFIGMPSMN
MVAASAIPSF SAATGGRLPS DGFLGVRPEG LRVHPKQAAP AGVPGRVELI EALGADTLIH
VDVGGVPLIA RQNERTPLHA GDDVAVELDP SVLHLFNREG RSVSA
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