| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1109 |
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| Symbol | |
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| ID | 7969631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1216218 |
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| End bp | 1217075 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644791705 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943026 |
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| Protein GI | 239814116 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC TCCTGCCCCG CGCCCTCATG GCGCCCGCCG TGCTCACGCT CCTTTTGTGG
ATGATCGTGC CGCTCGCGAT GACGTTGTAC TTCTCGTTTG TGAACTACAA CCTCATGCAG
CCCGGCGAGC GCACCTTCGC GGGCATCGAG AACTTTCACT ACTTCGTCAC CGATCCGGAC
TTCTGGCCCG CCACCTGGAA CACGCTGGTG CTGATCGGCA GCGTGATCGT CATCACCGTG
GTGCTCGGCG TGCTGCTCGC GCTCCTGGTG AACGAACCGT TTCCGGGCCG CGGCATCGTG
CGGGTGCTGC TGATCTCGCC GTTCTTCGTC ATGCCCGCGG TCAATGCGCT GCTGTGGAAG
CACATGATGA TGAACCCCAT CTACGGCATC CTGGCCGACG TGTGGCGCTT CTTCGGCGCG
ACGCCGGTCG ACTGGCTCAC CGACGTGCCG CTGTTCTCGG TGATCGTCAT GGTGGCCTGG
CAGTGGCTGC CGTTCGCCTG CCTGATCTTC ATCACCTCGC TGCAATCGCT CGACCGCGAG
CAGATGGAAG CCGCGCGCAT GGACGGCGCG AGCGCATTCC AGCGCTTCTT CTACCTGACC
ATCCCGCACC TCGGCCGGCC GATGGCGGTG GTGATCATGA TCGAGATGAT CTTCCTGCTC
AGCGTGTTCG CCGAGATCGC CATCACCACC AACGGCGGCC CGGGCAACGA GAGCACCAAC
ATGACCTACC TGATCTTCAA GCAGTCGCTG ATGAACTTCG ACGTGGGCGT GGCCTCGGCC
GGTGCGCTGT TCGCGGTGGT GCTGGCCAAC ATCGTGGCCG TGTTCCTGAT CCGCATCATC
GGCAAGAACC TCGACTGA
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| Protein sequence | MKRLLPRALM APAVLTLLLW MIVPLAMTLY FSFVNYNLMQ PGERTFAGIE NFHYFVTDPD
FWPATWNTLV LIGSVIVITV VLGVLLALLV NEPFPGRGIV RVLLISPFFV MPAVNALLWK
HMMMNPIYGI LADVWRFFGA TPVDWLTDVP LFSVIVMVAW QWLPFACLIF ITSLQSLDRE
QMEAARMDGA SAFQRFFYLT IPHLGRPMAV VIMIEMIFLL SVFAEIAITT NGGPGNESTN
MTYLIFKQSL MNFDVGVASA GALFAVVLAN IVAVFLIRII GKNLD
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