| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1107 |
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| Symbol | |
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| ID | 7969629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1213676 |
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| End bp | 1214575 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791703 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943024 |
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| Protein GI | 239814114 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.423986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCATG TGCGGCCGCG CCAGCTGCTG CTCCTGGCGC GGCTCGACAC CCACCGCCAC
CTGGGCCGCG CGGCCGAGGC CATGAACATC AGCCAGCCGG CCGCCACCAA GCTGCTGCAG
CAGCTGGAGG ATTCGCTCGG CGAAAGGCTC TTCGAGCGCC TTGCGCGCGG CATGGAGCCC
ACGCCCTACG GCGAGATCCT GATCCGCTAC GCCCGCCGCG TGCTCAGCGA CTTCGGCAGC
GCCCGAGAGG AAATGCTCGC GCTGCGCTCG GGCCTGAGCG GTTCGCTGCG CGTGGGCAGC
GTGCCGGGCG CGGTGCCCGA GCTGCTGGCG CCGGCGCTGG TCGAATACCA CCGCCGCCAT
CCGCAGGTGG CCGTGTCGGT GGTGGTGGAG ACCAGCGATG TGATGCAGGC GCAGCTGGAG
CAGGGCGACG TCGACCTGGT GCTGGGCCGG CTCACCGACA GCCACGACGA GGCCAAGTAC
GCGAGCGTGC CGCTGCTGGG CGAATCGCAG GTGGTGGTGG TGCGCGCCGC GCACCCGGTG
TTCGAGCGCG CCACCGTCAC GCTGGCCGAG ATGGCGAACT GGTCCTGGGT GCTGCAGCCG
CCGGGCTCGC CGCAGCGCGG GCGCTTCGAG GCGGCGATGC GCGAGGCGGG CATCCAGGCG
CGGCTCGACA TCATCGAAAC GGCATCGCCG ATCGCCATTA CCGCCTTGCT GGAAAACTCC
GACATGGCCG CCGTGATGCC GGCTTCGCAG GCCAGCCACT ACGCCCGCCT GGGCGTGCTG
CGCACGGTGC CGGTGGAGTT GCCGGTGCGC GTGCCGCCGA TCTGCCTCGT CACCCGGCAG
GACCGCGCGC TCTCGCCGGC CGCGGCGCAG TTCCGGCGCC AGCTGCTGGG CGGCGGCTGA
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| Protein sequence | MLHVRPRQLL LLARLDTHRH LGRAAEAMNI SQPAATKLLQ QLEDSLGERL FERLARGMEP
TPYGEILIRY ARRVLSDFGS AREEMLALRS GLSGSLRVGS VPGAVPELLA PALVEYHRRH
PQVAVSVVVE TSDVMQAQLE QGDVDLVLGR LTDSHDEAKY ASVPLLGESQ VVVVRAAHPV
FERATVTLAE MANWSWVLQP PGSPQRGRFE AAMREAGIQA RLDIIETASP IAITALLENS
DMAAVMPASQ ASHYARLGVL RTVPVELPVR VPPICLVTRQ DRALSPAAAQ FRRQLLGGG
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