| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1106 |
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| Symbol | |
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| ID | 7969628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1212569 |
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| End bp | 1213549 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791702 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943023 |
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| Protein GI | 239814113 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.171121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAT CCTTTCTTCT GGCCCGCGCC GCGGGCGCGG CTGCGCTGGC GCTGATGGCC
GCCACCGCCG GCGCACAGCA GCCGGCCTAT CCCGACAAGC CGCTGCGCAT CCTGGTCGGC
GCCTCGCCCG GCGGCGGCAC CGACATCCTG GCGCGCGTGC TGGCCGACAA GTTCGCGCCG
GTGCTCAAGC AGCCCGTGAC GGTGGAGAAC CGGCCCGGCG CCTCCAACAC CATTGCCGGC
GAGCTCACGG CGCGCGCTGC GGCCGACGGC AGCACGCTGC TGCTGGCCAC CAACACCGCG
CAGGCGGTGG CGCCGCACAT TCTCAAGCTC AAGTACGACC CGCTGAAAGA CCTGCAGCCG
ATCGGCCTGG TGGCCGTGAT GCCCAACGTG CTGGTGGTCT CGGCCAGCTC GCCCTACAAG
TCGGTGAAGG ACCTGCTGGC GGCCATGGCG GCCAAGCCCG GCGGCTTCAA GTACGCATCG
TCGGGCATCG GCAGCACGCA GCACGTGGGC GGCGAGGCCT TCAACCTGGC GACCGGCATG
AAGTCGATCC ACGTGCCCTA CAAGGGCAGC TCGCAGGCCC ACGTGGACAT CATCGGCGGC
GAGGTCGACA TGATGTTCGA CAGCACCTCC TCCGCCATGG GCCAGATCAA GGCCGGCAAG
TTCCGCGCGC TGGCCGTGAG CGCGCCGCAG CGCTCGCCCG AGCTGCCCGA CGTGCCCACG
CTGGCCGAGC AGGGCATCAA GGGCGCCGAT GTGTCCACCT GGTACGGCCT CTACGTGACC
GCCGGCACGC CGCGGCCCGC GGTCGAGCGG CTGAACGCCG AGCTCGTGCG CACGCTGAAG
CTTTCCGATG TGCAAACGCG CATCAAGGCC CTGGGCGGCG AGCCCGGTTC GCTGACCGGC
GAAGCCTTCG CGGCGATGAA CAGGCAGGAG TTCGACCACT ACGGCCAGCT CGTGCGCGAC
GCCAACATCA AGGCCGAATA A
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| Protein sequence | MKQSFLLARA AGAAALALMA ATAGAQQPAY PDKPLRILVG ASPGGGTDIL ARVLADKFAP
VLKQPVTVEN RPGASNTIAG ELTARAAADG STLLLATNTA QAVAPHILKL KYDPLKDLQP
IGLVAVMPNV LVVSASSPYK SVKDLLAAMA AKPGGFKYAS SGIGSTQHVG GEAFNLATGM
KSIHVPYKGS SQAHVDIIGG EVDMMFDSTS SAMGQIKAGK FRALAVSAPQ RSPELPDVPT
LAEQGIKGAD VSTWYGLYVT AGTPRPAVER LNAELVRTLK LSDVQTRIKA LGGEPGSLTG
EAFAAMNRQE FDHYGQLVRD ANIKAE
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