Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1104 |
Symbol | |
ID | 7969626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1211129 |
End bp | 1211458 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644791700 |
Product | protein of unknown function DUF805 |
Protein accession | YP_002943021 |
Protein GI | 239814111 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.280189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTC AAACAGCGGT CAAGACCTGT TTCAGCAAAT ACGCCGATTT CAACGGACGC GCATCGCGTT CGGAGTACTG GTGGTTCGTG CTGGCCGAGG TCATCGTTCT CATCGTGGCA AGCCTGATCC ATCAGTATGT GTACTTCATC GCGGCGCTGG GCTTCCTGTT GCCCGCGCTG GCCGTGGGCG CGCGCCGCCT GCACGACATC GGCAAGAGCG GCTGGCTCCA GCTGTTGATG ATCATTCCGA TCGTCAACCT GGTGCTGATC TATTTCTACG TGCAGCCCTC GCAGCCCGAA ACCAACCCGC ACGGCGCACC CGCCGCCTGA
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Protein sequence | MDFQTAVKTC FSKYADFNGR ASRSEYWWFV LAEVIVLIVA SLIHQYVYFI AALGFLLPAL AVGARRLHDI GKSGWLQLLM IIPIVNLVLI YFYVQPSQPE TNPHGAPAA
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