| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1102 |
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| Symbol | |
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| ID | 7969624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1208459 |
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| End bp | 1209415 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791698 |
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| Product | transaldolase B |
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| Protein accession | YP_002943019 |
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| Protein GI | 239814109 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC TCGATGCTCT CCGCCAATGG ACCACCGTGG TCGCCGACAC CGGCGACTTC
AAGCAACTTG CCATCTCCAG GCCGCAGGAC GCGACCACCA ATCCGTCGCT CATCCTGAAG
GCGGTGCAGA AGCCCGAGTA CCGGCCGCTG CTCGACGAAG CCGTGAGCAA GCATGCGGGC
AAGCCGCTCG ACGAGGTCAT CGACCGGCTG CTGGTGCGCT TCGGCACTGA AATCCTCTCG
ATCATTCCGG GCCGCGTGTC GACCGAAGTC GATGCGCGCC TTTCGTTCGA CACGGCCGCC
ACCGTGGCGC GCGGCGAGCG CATCGTGGCG CTCTACAAGG CCGAGGGCAT CGACACCGAG
AAGCGCCTGC TGATCAAGGT GGCCTCCACC TGGGAGGGCA TCGAGGCGGC GCGCACCCTG
GAGCAAAAGG GCATCCGCAC CAACCTCACG CTGCTGTTCT CGTTCGCGCA GGCGGTGGCC
TGCGGCGCAG CCGGCGTGCA GCTCATCTCG CCCTTCGTGG GCCGCATCTA CGACTGGTAC
AAGAAGTCGG CCGGCGCCCA GTGGAACGAG GCCGCCAGCG CGGGCGCGAA CGACCCCGGC
GTCAAGTCGG TGCGCCAGAT CTTCGAGTAC TACAAGCAGC ACGGCATCAA GACCGAGGTG
ATGGGCGCGA GCTTCCGCAA TGTGGGACAG ATTCGGGCCC TGGCCGGCTG CGACCTGCTC
ACCATCAGCC CCGAGCTGCT GGCCGAGCTG GCCGCGAGCA ACGAGCCGCT GGCGCATGCG
CTCGATGCCA AGGCGGCAAC CGGCGGCGAT GTCGCCAAGG TCAGCTACGA CGAGGCCGGC
TTCCGCTTCG CGCTCAACGA AGACGCCATG GCCACCGAGA AGCTCGCCGA GGGCATCCGC
GCCTTCGCGG CCGACGCCGT CAAGCTCGAG AAACTCATGC AGGAAAGCGG CAAGTAA
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| Protein sequence | MNQLDALRQW TTVVADTGDF KQLAISRPQD ATTNPSLILK AVQKPEYRPL LDEAVSKHAG
KPLDEVIDRL LVRFGTEILS IIPGRVSTEV DARLSFDTAA TVARGERIVA LYKAEGIDTE
KRLLIKVAST WEGIEAARTL EQKGIRTNLT LLFSFAQAVA CGAAGVQLIS PFVGRIYDWY
KKSAGAQWNE AASAGANDPG VKSVRQIFEY YKQHGIKTEV MGASFRNVGQ IRALAGCDLL
TISPELLAEL AASNEPLAHA LDAKAATGGD VAKVSYDEAG FRFALNEDAM ATEKLAEGIR
AFAADAVKLE KLMQESGK
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