| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1096 |
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| Symbol | |
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| ID | 7969618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1200923 |
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| End bp | 1202389 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791692 |
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| Product | glucose-6-phosphate 1-dehydrogenase |
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| Protein accession | YP_002943013 |
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| Protein GI | 239814103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
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| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.130518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCG ATCTCGTTCT GTTCGGCGGC ACTGGCGATC TCGCATGGCG CAAGCTGATG
CCCGCGCTGT TCCAGGCCTT CAGGCATGGC AGCCTCCCGA AAGACGGACG CATCGTCGGC
GTGGCCCGCG ACGACCTCTC GGACGACCAG TACCGCGAAC TGATCCAGTC GCGCTTCAAT
GCCGTCGAAG GCGCCAAGCG CCCTTCGGCC GAGGAGTTCG AGAAGTTCGC CTCGCTGCTG
CACTACCTGC GCATGGACCT GTCCAAGCCG GCCGACTACG CACGCCTTTC CGACCTGCTC
AAGCAGCGCA ATGCCGACAC GGTGGTGATG TACGTGGCCA CGGCGCCCGC GCTCTTCACG
CAGGTGGTCG AGCAGATCGC CGCAGCCGGC CTGAACGGCC CGTCGACCCG CGTGGTGCTC
GAAAAGCCGC TGGGCCATGA CCTGGCGTCC AACCGCGCGA TCAATGCCGC GGTGTGCAAG
GTGCTCGACG AGAAGCAGGT CTTCCGCATC GACCACTACC TGGGCAAGCC CTCGGTGCAG
AACCTGTTCG CCATGCGCTT CGGCAATGCG CTGTTCGAGC CCATCTGGCG CCGCGAGCAC
ATTGCCAACA TCCAGATCAC CATCGCCGAG GACCTGGGCG TCGAAAAGCG CGGCGCCTTC
TACGACCAGA CCGGCGCGCT GCGCGACATG GTGCAGAACC ATGCGCTGCA GCTGGTCTGC
GCGATCGGCA TGGAGCCGCC GATCAACTCG CATGCCGACG CCATCCGCGA CGAGAAGCTC
AAGGTGCTGC GCGCGCTCAA GCCCTGGACG CCCGAGACAC TGGGGCTGCA TGCCATTCGC
GGCCAGTACA CCGCCGGCAC GGCGTACGGC GAACGCGTGC CGGGCTACAA GGACGAGCCC
GGCGTCGACC CCGAAAGCCG CACCGAGACC TTCGTGGCGC TGCGCACGGA AATCGCCAAC
TGGCGCTGGG CCGGCGTGCC GCTGTACATC CGCACCGGCA AGCGGCTGGC CTCGCGCGAC
GCGCGCATCG AGGTCAACTT CAGGCCCACG CCGCATGCGA TCTACCGCGC ACCGGCCGGC
GCCGTCAACA AGCTGGTGAT CAACCTCCAG CCCCGCGACG GCCTGGAACT GCACATGCTC
GCGCAGGCGC AGGACAACCG CCGCAGCAAC GGCCACCAGA GCGCCGCGCA GCTCGCGCCG
GTGCAGCTGG ACCTCGACTT CGACAAGCGC TTCGGCGCCG AGCGCGTGGG CGCCTACGAA
CGGCTGCTGC TCGACGTGAT CGACGGCCGC CTGAACCTGT TCGTGCGCAG CGACGAGCAG
GAAGAAGCCT GGCGCTGGGT CGAACCGCTG ATCGACAGCT GGGCATCGGA CGGCGGGCCG
CGCCCCTACG CCGCGGGCAC CTGGGGGCCG AGCGCCTCGA GCGCGATGAT TGCGCGCGAC
GGCTTCTCGT GGAGCGAGGA ACAGTAG
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| Protein sequence | MSFDLVLFGG TGDLAWRKLM PALFQAFRHG SLPKDGRIVG VARDDLSDDQ YRELIQSRFN
AVEGAKRPSA EEFEKFASLL HYLRMDLSKP ADYARLSDLL KQRNADTVVM YVATAPALFT
QVVEQIAAAG LNGPSTRVVL EKPLGHDLAS NRAINAAVCK VLDEKQVFRI DHYLGKPSVQ
NLFAMRFGNA LFEPIWRREH IANIQITIAE DLGVEKRGAF YDQTGALRDM VQNHALQLVC
AIGMEPPINS HADAIRDEKL KVLRALKPWT PETLGLHAIR GQYTAGTAYG ERVPGYKDEP
GVDPESRTET FVALRTEIAN WRWAGVPLYI RTGKRLASRD ARIEVNFRPT PHAIYRAPAG
AVNKLVINLQ PRDGLELHML AQAQDNRRSN GHQSAAQLAP VQLDLDFDKR FGAERVGAYE
RLLLDVIDGR LNLFVRSDEQ EEAWRWVEPL IDSWASDGGP RPYAAGTWGP SASSAMIARD
GFSWSEEQ
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