Gene Vapar_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1086 
Symbol 
ID7969608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1190145 
End bp1190594 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID644791682 
ProductOsmC family protein 
Protein accessionYP_002943003 
Protein GI239814093 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.874568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGCA CAGTAAGTTG GACCGGCGAT GCCGGAACGC GATCGGCCAT GGGTTTCGTG 
GCCGAAACCG GCAGCGGCCA TGTCCTGATG ATGGACGGCG CGCCCGATGC CGCCAAACCC 
GAGAACGGCG GCCAGAACCT GGCGGCCCGG CCCATGGAAA CCGTGCTTGC GGGCACGGGT 
GGCTGCACTG CCTATGACGT GGTGCTGATC CTGAAGCGGG GCCGCCACCG CGTCGAGCGC 
TGCAGCGTCA AGCTGACCAG CGAGCGCGCG GAAAAGGATC CCAAGGTCTT CACCAAGATC 
CACATGCATT TCACTGTGGC GGGCAAGGGC ATTCCTGCGG CCGCCGTCGA GCGTGCGATT 
GCCCTGAGCC ACGAAACCTA CTGCTCGGCC AGCATCATGC TTGCGAAGAC CGCCGAGATC 
ACCACCAGCT TCGACCTGAT CGAAACCTGA
 
Protein sequence
MECTVSWTGD AGTRSAMGFV AETGSGHVLM MDGAPDAAKP ENGGQNLAAR PMETVLAGTG 
GCTAYDVVLI LKRGRHRVER CSVKLTSERA EKDPKVFTKI HMHFTVAGKG IPAAAVERAI 
ALSHETYCSA SIMLAKTAEI TTSFDLIET