| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1081 |
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| Symbol | |
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| ID | 7969603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1184649 |
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| End bp | 1185089 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791677 |
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| Product | general secretion pathway protein G |
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| Protein accession | YP_002942998 |
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| Protein GI | 239814088 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.464773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCCTACGCGA CGCCACCCGC GCTGCCCAGC GCGGCTTCAC GCTGATCGAG
CTGATGGTGG TGCTGGTCAT CATCGGCGTG CTGGCCGCGC TGATCGTGCC GAACGTGATC
GAGCGCGCCG ACGACGCCCG CGTGACCGCC GCCAGGACCG ACATCAACAA CCTGATGCAG
GCGCTCAAGC TCTACCGCCT GGACAACCAG CGCTATCCCA CGGCCGAGCA GGGCCTGCAG
GCGCTGCTGG TGCGCCCGAC CGTCGGGCCG GCCGCGCCCA ACTGGAAGCC CTATGTCGAG
AAGCTGCCGA ACGATCCGTG GGGCCATCCG TACCAATACA TGAATCCGGG TATCAAGGGC
GAAATCGACG TGCTCTCGCT CGGCGCCGAT GGCCAGGCCG GCGGCGAGGG CAAGAATGCC
GACATCGGCA GCTGGCAGTA G
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| Protein sequence | MKKILRDATR AAQRGFTLIE LMVVLVIIGV LAALIVPNVI ERADDARVTA ARTDINNLMQ
ALKLYRLDNQ RYPTAEQGLQ ALLVRPTVGP AAPNWKPYVE KLPNDPWGHP YQYMNPGIKG
EIDVLSLGAD GQAGGEGKNA DIGSWQ
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