| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1077 |
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| Symbol | |
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| ID | 7969599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1182158 |
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| End bp | 1183159 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791673 |
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| Product | general secretion pathway protein K |
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| Protein accession | YP_002942994 |
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| Protein GI | 239814084 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3156] Type II secretory pathway, component PulK |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.587027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT CCACGGTTTG CAGAACAACC GGGCAACGCC AGCGCGGCGC CGCGCTGCTC
GCGGCCATGC TGACCGTGAT GCTGGTCGCC ACCTTCTCCG CCGCGGCGCT GTGGCAGCAA
TGGCGCGCAT CCGAAGTCGA GGCGGCCGAG CGCGGACGCG TGCAGGCGGC GTGGGTGCTG
ATCGGCGCGC TCGACTGGTC GCGCCTGATC CTGCGCGAGG ACGCCCTCAC CGGCGGGCCC
GACCACCTGG CCGAGCCCTG GGCCGTGCCG CTCGCGGAAG CGCGGCTCAC GAGCTTTCTG
TCGGCCGAGA GGAACGTGGC CAGCGACAAC CTCGAAGGAC TGCCCGATGC CTTCCTGTCG
GGCCGCATCG TCGATGCGCA ATCCAAGCTC AACGTGCTGT CGCTGGTCGA CGGCAACAAG
CCGGTGCCGG CCAGCATCGC CACCTTCACC AAGCTGTTCA ACATCCTGGG CCTGCCGGCC
TCGGAGCTCA GCGCGATGAC GTCCTCGCTC GCGCGCGCGC TGGCCACCGG CACCGATGCT
GCCGGCGGCG GCGATGCCGG CGCGGCGCCG CTGATGCCGC AGGAGGTTTC GCAGCTGGTG
TGGCTCGGCC TTTCGCCTTC GACCGCGGCC GCGCTCGAGC CCTACGTGAC GGTCCTCCCG
ATACGCACGC CGCTCAACAT CAACACCGCG AGCGCCGAAG CCATCAGCGC CAGCCTGCCG
TCGCTGAGCA TCAGCGACGC GCGCCAGCTG GTGGAAAAGC GCACGCGCTC GTACTTCAAG
CAGATTGCCG ACGCCAACGC CGCGCTGCCG AACGGCGGCA CGCAGTTCAA CGCCGGCCAG
CACAGCGTAG GCACCCAGTT CTTCGAGGTC TACGGCCGGC TGCGGCTCGA CCGTACCTGG
GTCGAGGAAC GCTCGCTGCT GCAGCGCGAC GGCGTCACGG TGAAGACGAT CTGGCGCAAC
CGCGGCGCCG GCCTTGCCAC GGCCACTCCG GCTAAACCCT GA
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| Protein sequence | MTASTVCRTT GQRQRGAALL AAMLTVMLVA TFSAAALWQQ WRASEVEAAE RGRVQAAWVL
IGALDWSRLI LREDALTGGP DHLAEPWAVP LAEARLTSFL SAERNVASDN LEGLPDAFLS
GRIVDAQSKL NVLSLVDGNK PVPASIATFT KLFNILGLPA SELSAMTSSL ARALATGTDA
AGGGDAGAAP LMPQEVSQLV WLGLSPSTAA ALEPYVTVLP IRTPLNINTA SAEAISASLP
SLSISDARQL VEKRTRSYFK QIADANAALP NGGTQFNAGQ HSVGTQFFEV YGRLRLDRTW
VEERSLLQRD GVTVKTIWRN RGAGLATATP AKP
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