| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1070 |
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| Symbol | |
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| ID | 7969592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1173583 |
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| End bp | 1174482 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791666 |
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| Product | 5'-nucleotidase |
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| Protein accession | YP_002942987 |
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| Protein GI | 239814077 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0768314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTCA CGCTCGAAGA CAAGCTCGTG GTCGCGATCT CGTCGCGCGC GCTGTTCAAC
CTCGAAGAAG AAAACAGGAT CTTCGAGGCC GGCGACAACG AGGGCTACAT GAAGCTGCAG
CTCGACCGCA TCGACGTGCC GGCCGCGCCG GGCATCGCGT ACTCGCTGAT CCGCAAGCTG
CTGCGCTTCA ACGACGACGG CGTGCAGCGC GTCGAGGTGG TCATTCTTTC GCGCAACGAC
CCGGTCTCGG GCATGCGCAT CTTCCGCTCG AGCGCGGCGG CCGACATCAA GCTGCAGCGC
GGCGTGTTCA CGCAGGGGCG CCCGCCCTTC GGCTACCTGC GGCCGCTGCG CGCGCACCTG
TTCCTGTCGG TCAACGCGCA GGACGTGCGC GAAGCGCTGG GCGCGGGCTT TCCGGCCGCG
CGCGTGCTGG TCGAATCGGT GAAGGCCAGC GATGCCTGGC CCAACGAAGT GCGCATTGCC
TTCGATGGCG ATGCGGTGCT CTTCAGCGAC GAGGCCGAGC GCGTGTTCCA GGCCGAGGGG
CTCGATGCCT TCCAGGCGCA CGAACTCAGC AAGGCCGACC TGCCGCTGCC CGAAGGCCCC
TTCAAGCCGC TGCTGACGGC GCTGCATCGC CTGCAGATGG CGGGCAATGC GCAGATGCGC
ATCCGCACCG CGCTGGTCAC CGCGCGCAGC GCCCCGGCGC ACGAGCGCGC GATCCGCACG
CTCATGAAGT GGAACATCCG CGTCGACGAG GCGATGTTCC TCGGCGGCCT GCCCAAGGGC
GAATTCCTGC GCGAGTTCGA ACCCGACTTT TTCTTCGACG ACCAGACCGG CCACGTCGAT
GCCGCGGCGC GCCACGTGCC CGCGGGCCAC GTCTCCAGCG GCATCAGCAA CGAGCGCTGA
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| Protein sequence | MPVTLEDKLV VAISSRALFN LEEENRIFEA GDNEGYMKLQ LDRIDVPAAP GIAYSLIRKL
LRFNDDGVQR VEVVILSRND PVSGMRIFRS SAAADIKLQR GVFTQGRPPF GYLRPLRAHL
FLSVNAQDVR EALGAGFPAA RVLVESVKAS DAWPNEVRIA FDGDAVLFSD EAERVFQAEG
LDAFQAHELS KADLPLPEGP FKPLLTALHR LQMAGNAQMR IRTALVTARS APAHERAIRT
LMKWNIRVDE AMFLGGLPKG EFLREFEPDF FFDDQTGHVD AAARHVPAGH VSSGISNER
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