| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1059 |
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| Symbol | |
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| ID | 7969581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1159737 |
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| End bp | 1161983 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791655 |
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| Product | cyanophycin synthetase |
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| Protein accession | YP_002942976 |
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| Protein GI | 239814066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.115061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTT TCGACGACAT CCGCCTGCTG CGCATCAACT ATTTGCGCGG TCCCAACCTC
TGGACCTACC GGCCCGTGCT GGAAGTCTGG CTCGACCTGG GCCAGCTGGA GGACTACCCC
TCCAACAAGA TCGACGGCTT CACCGACCGG CTCACGGCGC TGCTGCCGGC GCTCATCGAG
CACCACTGCG GCGTGGGCGA GCGCGGCGGC TTCATCCAGC GGCTGACCGA AGGCACCTGG
TCGGGCCACG TGCTGGAGCA CGTGGTGATC GAGCTGCTGA ACCTGGCCGG CATGCCGACC
GGCTTCGGGC AGACCCGCAG CACCTCGGAG CACGGCGTCT ACCGCATGGT GTTCCGCGCG
CGCGACGAGC AGGTGGCCCG CGTGGCGCTG GCCCAGGGCC ACCGCCTGCT GATGGCGGCG
ATCAACAACG ACCCCTTCAC CGCCGATGAC GTGCAGAAGG CGGTCGATGC GGTCAAGGCC
AAGGTCGAGG ACTGCTACCT GGGCCCGAGC ACCGCGGCCA TCGTGTCCGC CGCCACCGAC
CGCGGCATTC CGCACATCCG GCTCAACAGC GGCAACCTGG TGCAGCTGGG CTACGGCGCC
AACCAGCAGC GCATCTGGAC CGCCGAGACC GACTACACCA GCGCCATCGG CGAATCGATC
GCGAGCGACA AGGAGCTGAC CAAGTCGCTG CTCGCGAGCT GCGGCGTGCC GGTGCCCGAA
GGCCAGGTGG TGGCCAGCGC CGAGGAAGCC TGGGAAGCGG CCGAGGACAT CGGCCTGCCG
GTGGTCGTGA AGCCGTCGGA CGCCAACCAC GGCCGCGGCG TGTCGCTCGA GCTGACCACG
CGCGACGAAG TCATGGCCGC CTTCGCGGTG GCCGAGCCCG AAGGCAGCGA CGTGATGGTC
GAGCGCTTCA TCCGCGGCCA CGAACACCGC CTGCTGGTGG TGGGCGGCGA GGTGGTGGCG
GCCGCGCGCG GCGAGATCAT CACCGTGACC GGCGACGGCA AGAGCACCGT GGCCGAGCTG
ATCGACAAGC AGCTCAACAG CGATCCGCGC CGCGGCGCCG AAGAGGAATA CCCGCTCGAC
CTGATCGTGC TGGACACCGA CGCCAAGCTG CAGCTCGAAC TCAAGCGCCA GGAGCTCGAC
GGCGCCTCGG TGCCGGCGGC CGGCCGCGTG GTCACGATCC AGCGCAACGG CAACATGGCC
AACGACTGCA CCGACCAGGT CCATCCTGAA GTCGCGCATG CCGCCGTGCT GGCCGCACGC
GTGGTGGGCC TGGACATCGC GGGCATCGAC CTGGTGGCAC TGGACATCGG CAAGCCGCTC
GGCCCGCAGC GCGGCGCCAT CGTCGAAGTG AATGCCGGCC CCGGCCTCTT GATGCACCTG
AAGCCGGCCG TCGGCTCGCC GCGCCCGGTG GGCCGCGCGA TCTGCGACCA CCTGTTCCCG
GGCGATGCGC CGGGCCGCAT CCCCGTGATC GGCGTGGCCG GCTCGCGCGA CACCGCGGTG
CTCGCGCGCC TGGTCGCCTG GCTCATCAAC CTGGGCGGGC GCCACACGGG CCTGGCCTGC
CGCGACGGCC TGTTCCTGGA GCGCCGCCGC GTCGATGCGC GCGACAGCGC CAACTGGGAG
GCCGGCCGCC GCCTGCTGGT GAACCGCGCG GTGGAAGCCG TGGTGATCGA GAACGGCGCC
GAGACCATCC TGCGCGACGG CCTGGCCTAC GACCGCTGCG AGCTCGGCAT CGTGACCGAC
CTCGAAGGCG CCGAGGCGCT GGCCGACTAC GACATCACCG AGAGCGACCA GATGGTCAAG
GTGCTGCGCA CGCAGGTCGA CGTGGTGCTG GGCGAAGGCA CCGCGGTGCT CAACGCGGGC
GATCCGCGCG TGGCGGGCCT GGCCCCGCTG TGCGACGGCG CCGTCATTCT CTATGCGGCC
GACCCGCAGG CTGCCGCGCT CACCGCGCAC CAGGCCGCCG GCGGCAAGGC CGTGCTGGTG
CGGCAGGACC GCGTGGTGCT GGCCAACGGC AGCAGCGAAT CCTTCCTGCC CGGCCTCGGC
CGGCTGACCG TCTGGCGCGC CACGCACGCG GGCGTGAGCC TGGAGAGCGT GCTGGCCGCG
GTGGCCGCGG CCTGGGCGCT GGGCATTCCG CTGAACCTCA TCGGCGCCGG CGTCGAGGCC
TTCGAGGCCG ACCTGCAGGC GGCGCTGGCC TCGCTGCAGC TTTCGCAGAC GCAGCCGCTT
TCGTCCCCCC AACTGCAACT CGCCTGA
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| Protein sequence | MTRFDDIRLL RINYLRGPNL WTYRPVLEVW LDLGQLEDYP SNKIDGFTDR LTALLPALIE
HHCGVGERGG FIQRLTEGTW SGHVLEHVVI ELLNLAGMPT GFGQTRSTSE HGVYRMVFRA
RDEQVARVAL AQGHRLLMAA INNDPFTADD VQKAVDAVKA KVEDCYLGPS TAAIVSAATD
RGIPHIRLNS GNLVQLGYGA NQQRIWTAET DYTSAIGESI ASDKELTKSL LASCGVPVPE
GQVVASAEEA WEAAEDIGLP VVVKPSDANH GRGVSLELTT RDEVMAAFAV AEPEGSDVMV
ERFIRGHEHR LLVVGGEVVA AARGEIITVT GDGKSTVAEL IDKQLNSDPR RGAEEEYPLD
LIVLDTDAKL QLELKRQELD GASVPAAGRV VTIQRNGNMA NDCTDQVHPE VAHAAVLAAR
VVGLDIAGID LVALDIGKPL GPQRGAIVEV NAGPGLLMHL KPAVGSPRPV GRAICDHLFP
GDAPGRIPVI GVAGSRDTAV LARLVAWLIN LGGRHTGLAC RDGLFLERRR VDARDSANWE
AGRRLLVNRA VEAVVIENGA ETILRDGLAY DRCELGIVTD LEGAEALADY DITESDQMVK
VLRTQVDVVL GEGTAVLNAG DPRVAGLAPL CDGAVILYAA DPQAAALTAH QAAGGKAVLV
RQDRVVLANG SSESFLPGLG RLTVWRATHA GVSLESVLAA VAAAWALGIP LNLIGAGVEA
FEADLQAALA SLQLSQTQPL SSPQLQLA
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