| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1031 |
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| Symbol | |
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| ID | 7972002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1124811 |
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| End bp | 1126070 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791627 |
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| Product | protein of unknown function DUF1504 |
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| Protein accession | YP_002942948 |
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| Protein GI | 239814038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGC CCACCATCCA GTACCTTGCC GCAGCGATCT TCGCCGTCGC GCTCGTCCAC
ACCTTCGCCG CCAAGCAGTT CGAGCGGCTG TCGCACCGCT TTCCCCGCCA TGCCGGCCTC
TTTCACCTGC TGGGCGAGGT GGAAGTCGTC TTCGGCTTCT GGGCCATCGT GCTTGTGCTT
GCGATGGCCC TGGTCGTTGG CGGCGGGCCG GCACTCGGCT ATGCGGAGTC GCGCAACTAC
ACCGAGCCCC TGTTCGTCTT CGTCGTGATG GTGGTGGCCG CCTCGCGGCC CGTGCTGCGC
ACCGTCATGT CGGGCGTGAG CCTTGTCGCG CGGGTGCTGC CGCTGCCCAC GCCCGTTGCG
GCGGCATGGC TCGGCCTGGC GGCCGTTCCG CTGCTGGGCT CGCTCGTCAC CGAGCCCGCG
GCCATGACCA TTGCGGCGCT GATGCTCGCG CCGCAGATCT TCAGGCCGCA GGTGCCCGAA
GCCGTGAAGT ACCTCGCGCT GGGCGTGCTG TTCGTCAACG TGTCGATCGG CGGCACGCTC
ACGTCGTACG CCGCGCCGCC GGTGCTGATG GTGGCCTCGA CCTGGCAATG GGACAGCGCC
TTCATGCTTG CCACCTTCGG CTGGAAGGCC GCCGTGGCCG TGCTCGTCAA CGCCACCGTG
GCCACTTTCG TATTGCGCAA GCACCTGCCC GCGGCTTCGA GCGCGCACGC GGCGCTCTCC
GAAGCGCCCG TGCCGCCCGC CGTGGCGCTG GTGCACCTCG TGCTGCTGGC CGGTATCGTG
CTGTTCGCAC ATCATCCGGT GGCGTTCCTC GGGCTCTTCC TGATGTTTCT CGGCTACACG
CAAGCCTACG AGCGCCACCA GAGTCCGCTC ATCATCAAGG AGGCACTGCT CGTCGGCTTC
TTCCTGGCGG GGCTGGTGGT GCTCGGCGGC ATGCAGCAGT GGTGGCTGGA GCCGGTCGTA
TCGAGCCTGC AGCCGCTCGC CTTGTTCTTC GGCGCACTGG GCCTCACGGC CATCACCGAC
AACGCGGCGC TCACCTACCT GGGTTCGCTG ATCACCAACA TCTCGGACGA ATCGAAGTAC
ATGCTCGTGG CCGGCGCGGT GGCCGGCGGC GGCCTGACGG TGATTGCCAA CGCGCCCAAT
CCCGCGGGCG TCGCGCTGCT CAAGCGCGGC TTCTCCGACG AGACCATCGG CGCCGGCGGA
CTGCTGCTGG GTGCGCTCGG GCCCACGCTG GTGGCCGCCG CGGCTTTCAT GCTGTTGTAG
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| Protein sequence | MQEPTIQYLA AAIFAVALVH TFAAKQFERL SHRFPRHAGL FHLLGEVEVV FGFWAIVLVL
AMALVVGGGP ALGYAESRNY TEPLFVFVVM VVAASRPVLR TVMSGVSLVA RVLPLPTPVA
AAWLGLAAVP LLGSLVTEPA AMTIAALMLA PQIFRPQVPE AVKYLALGVL FVNVSIGGTL
TSYAAPPVLM VASTWQWDSA FMLATFGWKA AVAVLVNATV ATFVLRKHLP AASSAHAALS
EAPVPPAVAL VHLVLLAGIV LFAHHPVAFL GLFLMFLGYT QAYERHQSPL IIKEALLVGF
FLAGLVVLGG MQQWWLEPVV SSLQPLALFF GALGLTAITD NAALTYLGSL ITNISDESKY
MLVAGAVAGG GLTVIANAPN PAGVALLKRG FSDETIGAGG LLLGALGPTL VAAAAFMLL
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