Gene Vapar_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1029 
Symbol 
ID7972000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1122903 
End bp1123232 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content69% 
IMG OID644791625 
Productprotein of unknown function DUF326 
Protein accessionYP_002942946 
Protein GI239814036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACATC AAACCTACGC CGCATGCATC GAGGCGTGCA ACGGCTGCGC CACCGCATGC 
CATCACTGCG CCGCGTCCTG CCTGAAGGAG CCCGACGTCC AGATGATGGC CCGGTGCATC
GCGCTCGACA TGGATTGCGC GGCCGCCTGC CAGTTTGCCG CGGCCGCCAT GGCGCGCGGC
AGCGAACATG CGAAAGCCAT CTGCGCGCTG TGCGCCGGCA TCTGCGAAGC CTGCGGCGAG
GAATGCGCCA GGCACAAGCA CGAGCACTGC CAGGCCTGCG CCAAGGCCTG CCGCGATTGC
GCAGCCGCGT GCCGCGCGAT GGCACGCTGA
 
Protein sequence
MPHQTYAACI EACNGCATAC HHCAASCLKE PDVQMMARCI ALDMDCAAAC QFAAAAMARG 
SEHAKAICAL CAGICEACGE ECARHKHEHC QACAKACRDC AAACRAMAR