| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1024 |
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| Symbol | |
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| ID | 7971995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1117888 |
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| End bp | 1118733 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791620 |
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| Product | precorrin-4 C11-methyltransferase |
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| Protein accession | YP_002942941 |
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| Protein GI | 239814031 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2875] Precorrin-4 methylase |
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| TIGRFAM ID | [TIGR01465] precorrin-4 C11-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.249462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGC GAGCCATCGC TCCAGGCAGT GCGCCGACGC CGGGAACCGT GTGGTTCGTC
GGTGCGGGCC CGGGCGATCC GGAACTCATC ACCGTCAAGG GCCGCGGCCT CGTCGAGCGC
GCCGGGGCGA TCCTGTTCGC GGGCTCGCTC GTGAGCGAAA CCGCCATGCG CTGGGCGCGG
CCGGACTGCG CCATTGCCGA CAGCAAGGAC ATGACGCTCG AGCAGATGTC GGCCTGGCTG
ATCGCGCAGG CCGCGCGCTG CGAGACCGTG GTGCGCCTGC AGACCGGCGA CCCGGGCCTG
TACGGCGCAC TGATCGAGCT GGTGCAGCCG CTGGATGCGG CGGGCGTGCC GATCGGCGTG
GTGCCGGGCG TGTCCTCCGC CATGGCCTCG GCGGCGGCGG CGGTGGAAAG CCTCACGCTG
CCCGAGGTCA CGCAGACCGT GATCTTCACG CGCGTCGAAG GCCGCACGCC CATGCCCGAG
GGCGAGTCGC TCGAGGCGCT CGCCGCGCAC CACAGCACGC TGTGCATCTT CCTGAGCATC
ACCCTGATGG GCAAGGTCAC GGCCGCGCTC ACGGCCGCCG GCTGGTCGCC CGATGCGCCC
GTGGTGGTGG TTCACAAGGC AAGCTGGCCG GGCGAAGAGA AGATCGTGCG CGGCACGGTC
GCGACCATCC AGGCGCTGTG CCGCGAGGCC CGCATCGCGA GCCAGTCGAT GATCATCGCC
AGCCCCACGC TGGGCGCGCG GCAGTGGACC ACGCTCGCCA AATCCAAGCT CTACGACGCG
AGCTTCACGC ACCGCTTCCG GCGCGCGAGC GTTCCCGTCC AAACCCTGCG CCAGGAACTC
CCATGA
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| Protein sequence | MNERAIAPGS APTPGTVWFV GAGPGDPELI TVKGRGLVER AGAILFAGSL VSETAMRWAR
PDCAIADSKD MTLEQMSAWL IAQAARCETV VRLQTGDPGL YGALIELVQP LDAAGVPIGV
VPGVSSAMAS AAAAVESLTL PEVTQTVIFT RVEGRTPMPE GESLEALAAH HSTLCIFLSI
TLMGKVTAAL TAAGWSPDAP VVVVHKASWP GEEKIVRGTV ATIQALCREA RIASQSMIIA
SPTLGARQWT TLAKSKLYDA SFTHRFRRAS VPVQTLRQEL P
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