Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1023 |
Symbol | |
ID | 7971994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1116962 |
End bp | 1117891 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791619 |
Product | cobalamin (vitamin B12) biosynthesis CbiX protein |
Protein accession | YP_002942940 |
Protein GI | 239814030 |
COG category | [S] Function unknown |
COG ID | [COG2138] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.381916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCCG AAACCATTCT GCTGGTGGGC CACGGCTCGC GCGAAAAATC CGGCAACGAC GAGATCGAGG CCTTTGCCGC GCAATGGCGC GAGCGGCAGC CGGGCTGGCG CATCGAGGTC TGCTTCATCG AGTTCTCCGA GATCACGATG AGCGAGGGCC TGCGCCGCGC GGCCGAGAGC GCGCGGCGCG TGATCGTGGT GCCGCTCATC CTCAATGCCG CGGGCCACGT GAAGATGGAC GTGCCGCAGG CCATCGACGG CGCCCGGCTC AAGTACCCGA TGGTGCAGTT CCTCTACGCG CCGCACCTCA CGGCCTGCGA TCCGATCCTC GCGATCCTCA AGCGCCGCCT CAAGGACGCG ATGCAGGCGC TCGACATGCC CGACCCGACC ACCACCGGCG TGGTGATCCT GGGCCGGGGT TCGTCGGACC GCCAGGCCAA TGGCGACATG GCCAAGATGG CGCGCTGGCT GATGGAGGAG ACCGACCACG AGCTGGTCGA CCTTGCCTTC ACCGGCATCA CCTACCCGCG CCTGGAGAAG GCCGTGCAGC GCCAGGGCCT GCTGGGCATG AAGCAGGTGG TGGTGCTGCC CTACTACCTG TTCAACGGCA CGCTGGTCGA ACGCATCGCG CGCCAGGTCG AGCACCTGAA GGCGCAGTAC CCGACGATCC GTTTCGTTTC CACGCGCTAC TTCGGCTTCG AGCCCGAGAT CTTCGCGCTG CTCGAACAGC GCGTGGACGA CCTGCGGCGC GGCGCGCCGG CCGCGCTCAT GCCTTGCGAC GGCTGCAAGT TCCGCGACTT TGCGGTGGAG CACGGGCTGG GCGGCCACCA CCATGGCGAT GCGGCGGCGC ACGGCCACGA CCACGACCAC GATCACGACC ACGCGCATGG CCACGTCCAT GCGCACGACG CGGTGCCGGC GCTGCGATGA
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Protein sequence | MNSETILLVG HGSREKSGND EIEAFAAQWR ERQPGWRIEV CFIEFSEITM SEGLRRAAES ARRVIVVPLI LNAAGHVKMD VPQAIDGARL KYPMVQFLYA PHLTACDPIL AILKRRLKDA MQALDMPDPT TTGVVILGRG SSDRQANGDM AKMARWLMEE TDHELVDLAF TGITYPRLEK AVQRQGLLGM KQVVVLPYYL FNGTLVERIA RQVEHLKAQY PTIRFVSTRY FGFEPEIFAL LEQRVDDLRR GAPAALMPCD GCKFRDFAVE HGLGGHHHGD AAAHGHDHDH DHDHAHGHVH AHDAVPALR
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