| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1012 |
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| Symbol | |
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| ID | 7971983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1108316 |
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| End bp | 1109554 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791608 |
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| Product | catalytic domain of components of various dehydrogenase complexes |
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| Protein accession | YP_002942929 |
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| Protein GI | 239814019 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.507919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGC ATGCAATCAA GGTGCCGGAC CTTGGCGAAG GCATTGCCGA GGTGGAGCTG
GTGGCGTGGC GCGTGCAGCC CGGCGACACG GTGGCGGAAG ACCAGGTGCT GGCCGACGTG
ATGACCGACA AGGCCACCGT CGAGATTCCC TCGCCGGTCG CGGGCCGGGT GCTCGCGCTC
GGCGGCGAAG TGGGGCAGCA GCTCGCGGTG GGCGCGGAGC TGATACGGAT CGACGTGGAG
GCGCAGGGTG AGGCGGTGCA GGTGCCGGCC GCGCACGCAC GCGCGTCCGC GCCCGTGCCG
GCACCTGCAC CGGCGGTAGC AGCTGCGGCG ACATCCGCTC CGGCCGTGCG CATATCCTCA
TCGGCCGGCA AGCCGCTCGC CGCACCCGCG GTGCGCCATC GCGCCGCGGT GCTCGGCATC
GATCTGCAGC AGGTGCCGGG CAGCGCCGCG GACGGCCGCA TCCTGCACGA GGACCTCGAC
GCCTGGCTGC TCCGCAGGCA GGGCGCGCAG GCGCCGGGCC CGCCGCGTTA CGCGGAGCGC
CACGACGAGG AGGCCGTGCC CGTGACCGGC GTGCGCCGCC GCATCGCGCA GCGCATGCAG
GATGCGATGC GCCGCATCCC GCACTTCACC TACGTCGAGG AAGTCGACGT GACCGAGCTG
GAGCTGCTGC GCGCGCGGCT CAACGAACGC TGGGGCAGCG AGCGGGCGCA CCTGACGCTG
CTGCCGCTGC TGGTGCGCGC CATCGTGCTG GCGGTGCCGC GCTTTCCGCA GGTCAATGCC
CGCTTCGACG ACGAGACCGG CGTGCTCACG CGCCACGGCG CAGTGCATGC CGGCATCGCG
ACCCAGACCG CCGTGGGCCT CATGGTGCCG GTACTGCGCC ACGCCGAAGC GCGCGACCCC
TGGTCCAGCG CAACCGAGAT CGCGCGCCTG GCCGAGGCCG CGCGCGCGGG CCGCGCCACG
CGCGACGAGC TGAGCGGCTC GACCATTACC GTCACCAGCC TCGGCGCGCT GGGCGGCATC
GCGTCCACGC CGATCATCAA TGCGCCCGAG GCGGCGATCG TCGGCGTCAA CCGCATCGTG
CAGCGCCCGG TGATGAAGGA TGGCGCCGTG GTCGCGCGCC GCATGATGAA CCTGTCATCC
TCCTTCGACC ACCGCGTGGT CGACGGCCAG CTGGCGGCCG AGTTCGTGCA GGCCGTGCGC
GCCTCGCTCG AATGCCCGGC GCTGCTCTTT GTCGAATAG
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| Protein sequence | MATHAIKVPD LGEGIAEVEL VAWRVQPGDT VAEDQVLADV MTDKATVEIP SPVAGRVLAL
GGEVGQQLAV GAELIRIDVE AQGEAVQVPA AHARASAPVP APAPAVAAAA TSAPAVRISS
SAGKPLAAPA VRHRAAVLGI DLQQVPGSAA DGRILHEDLD AWLLRRQGAQ APGPPRYAER
HDEEAVPVTG VRRRIAQRMQ DAMRRIPHFT YVEEVDVTEL ELLRARLNER WGSERAHLTL
LPLLVRAIVL AVPRFPQVNA RFDDETGVLT RHGAVHAGIA TQTAVGLMVP VLRHAEARDP
WSSATEIARL AEAARAGRAT RDELSGSTIT VTSLGALGGI ASTPIINAPE AAIVGVNRIV
QRPVMKDGAV VARRMMNLSS SFDHRVVDGQ LAAEFVQAVR ASLECPALLF VE
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