| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1010 |
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| Symbol | |
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| ID | 7971981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1106056 |
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| End bp | 1107297 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791606 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_002942927 |
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| Protein GI | 239814017 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.441228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG GCGTATCTCT TCGTCTGCAT GTGCCGGAGC CCACCGGGCG GCCGGGGCAT
GAGACGGACT TTTCCTATCT CCACCTGTCG CGCGCCGGCG AGGTGCGAAA ACCCCCGGTC
GACGCGTCGC CGGCCGACAC CAGCGACCTG GCCTACACAC TGGTGCGCGT GCTCGACGAC
GAGGGCCGCG CAGTCGGCCC GTGGGCGCCC GAGGCCGACC CCGAGCTGCT GCGCCGCGGC
CTGCGCGCGA TGATGAAGAC ACGCGCCTTC GACGCCCGCA TGCTGATCGC GCAGCGGCAG
AAAAAAATAT CGTTCTACAT CCAGTGCCTT GGCGAAGAGG CCATTGCCAC CGGCCACGCG
CTGGTGCTGC AGCAGGGCGA CATGTGCTTT CCCACCTACC GCCAGCAGGG CCTGCTGCTG
GCGCGCGACG ACGTGACGCT GCTCGAGCTG ATCTGCGAGC TGATGTCCAA CGAGCGCGAT
CCGCTCAAGG GACGGCAGCT GCCGGTGTGC TATTCGATGA AGCGGGCCGG CTTCTTCTCG
ATCTCGGGCA ACCTGGCCAC GCAGTTCATC CAGGCGGTGG GCTGGGGCAT GGCCTCGGCG
ATCAAGGGCG ACACGCGCAT TGCCTCGGGA TGGATCGGCG ACGGCGCCAC CGCCGAGTCG
GACTTCCACA CGGCGCTGAC CTTCGCGCAC GTGTACCGCG CGCCGGTGAT CCTCAACGTG
GTCAACAACC AGTGGGCGAT CTCGACCTTC CAGGCGATTG CCGGCGGCGA GGCCACCACC
TTCGCGGCGC GGGGCGTGGG CTGCGGCATC GCATCGCTGC GCGTCGACGG CAACGACTTT
CTCGCGGTGC TGGCGGCCTC GCGCTGGGCC GCCGAGCGCG CCCGCAGCAA CCTCGGGCCG
ACGCTGATCG AATGGGTGAC CTATCGCGCC GGCGCGCACT CGACCTCGGA CGATCCCTCG
CGCTACCGTC CGGCCGACGA CTGGGCGCAT TTTCCGCTGG GCGATCCGAT CCCGCGCCTG
GCGCAGCACC TGAGGTCCAT CGGCGCCTGG TCGCAGCAGG AGCACGAGCA GACGCAGGCC
GACCTGGAGG CGCAGGTGAA CACCGCGCTG AAGGAGGCCG AGCGCTTCGG CTCCATGGCC
GACGGCCACG TCGCCGGCGC CGCGACCATG TTCGAGGACG TCTACAAGGA AATGCCCGAG
CACCTGAAGC GGCAGCGCGA GCAGCTCGCG TCCGAGGGCT GA
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| Protein sequence | MSQGVSLRLH VPEPTGRPGH ETDFSYLHLS RAGEVRKPPV DASPADTSDL AYTLVRVLDD
EGRAVGPWAP EADPELLRRG LRAMMKTRAF DARMLIAQRQ KKISFYIQCL GEEAIATGHA
LVLQQGDMCF PTYRQQGLLL ARDDVTLLEL ICELMSNERD PLKGRQLPVC YSMKRAGFFS
ISGNLATQFI QAVGWGMASA IKGDTRIASG WIGDGATAES DFHTALTFAH VYRAPVILNV
VNNQWAISTF QAIAGGEATT FAARGVGCGI ASLRVDGNDF LAVLAASRWA AERARSNLGP
TLIEWVTYRA GAHSTSDDPS RYRPADDWAH FPLGDPIPRL AQHLRSIGAW SQQEHEQTQA
DLEAQVNTAL KEAERFGSMA DGHVAGAATM FEDVYKEMPE HLKRQREQLA SEG
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