Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1009 |
Symbol | |
ID | 7971980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1105676 |
End bp | 1105954 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791605 |
Product | Excinuclease ABC C subunit domain protein |
Protein accession | YP_002942926 |
Protein GI | 239814016 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.53905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGAT CCCTGCCCGA CCCCGATCCC GTGCCCTACT GGCTCTATCT CCTGGAGTGC GAAGGCGGCG TGTACTACGC AGGGATCGCG CTCGACGTGG AGCAGCGCTT CTTCCAGCAT GTGTTCGGAC TCGGCGCCAA GTTCACGCGC GCGCGTCCTC CGCTGCGCGT GCTTGCAGCG CGCGCCTATC CCGACAAGGG CGCCGCGCTG CGGGCGGAGA TCAGGGTCAA GGCATTGCCC CGTGCGCGCA AGCTCGCTTT CTTCGACGCC GAGGACTGA
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Protein sequence | MPRSLPDPDP VPYWLYLLEC EGGVYYAGIA LDVEQRFFQH VFGLGAKFTR ARPPLRVLAA RAYPDKGAAL RAEIRVKALP RARKLAFFDA ED
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