| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1001 |
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| Symbol | |
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| ID | 7971972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1098751 |
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| End bp | 1100631 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791597 |
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| Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_002942918 |
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| Protein GI | 239814008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGGCA TCGTCGGCGC AGCGTCCCAT CGCAACATCG TTCCGGTCCT GGTCCAGGGC
CTGCAGAGGC TCGAATACCG CGGCTACGAC TCCTGCGGCG TGGCGGTCCA TGCGGGCGGC
CTCACGCGGG CGCGCACCAC CTCGCGCGTG GCGGACCTCG TCACGCAGGT GCGCGAAGAA
CATGTCGAAG GTCTGACCGG CATCGCCCAC ACGCGCTGGG CCACGCACGG CGCCCCCGCG
GTGCACAACG CGCACCCGCA CTTCAGCCAT GGCCCGGGCG CCGATGCGCA AGGCGCGCGG
CCAGGCCGCA TCGCGCTGGT GCACAACGGC ATCATCGAGA ACCACGAAAC CCTGCGCGCG
GCGCTCGAAG CCAAGGGCTA CGTGTTCGAG AGCCAGACCG ACACCGAGGT CATCGCCCAC
CTCGTCGACA GCCTCTACGA CGGCGACCTG TTCGAGGCCG TGAAGGCCGC GGTGCTGCAA
CTGCACGGCG CCTATGCCAT TGCCGTGATG TGCCGCGACG AGCCGCAGCG CGTGGTCGGC
GCGCGCGCGG GCTCGCCGCT GATCCTGGGC GCGGGCAAGG AGGGCGGCGA GAACTTCCTC
GCGAGCGATG CCATGGCGCT GGCCGGCGTG ACCGACCAGA TCGTCTACCT CGAGGAAGGC
GACGTGGTCG ACCTGCAGCC GGGCAAGTAC TGGATCGTCG ACCGCAACCA CAAGCCCGTG
CAGCGCCAGG TGCGCACCGT GCAGGCGCAC AGCGGCGCGG CCGAGCTCGG CCCGTACCGC
CACTACATGC AGAAGGAAAT CTTCGAGCAG CCGCGCGCCA TCGCCGACAC GCTCGAGGGC
GTGGCCGGCA TCGTGCCCGA GCTGTTCGAC GGCATCGGGC AGGACGGCGC CACCGGTGCC
AGCGCGCACC GCGTGTTCAA GGACATCGAC AAGATCCTCA TCCTGGCCTG CGGCACCAGC
TACTACAGCG GCTGTACCGC CAAGTACTGG CTCGAGAGCA TCGCGAAGAT CTCGACGCAG
GTCGAGATCG CAAGCGAGTA CCGCTACCGC GATTCGGTGC CCGATCCGAA GACGCTGGTG
GTCACCATCA GCCAGTCGGG CGAAACGGCC GACACGCTGG CCGCGCTCAA GCATGCGCGC
TCGCTCGGCA TGGAACAGAC GCTGACCATC TGCAACGTGG CCACCAGCGC GATGGTGCGC
GAATGCAAGC TCGCCTACAT CACGCGCGCC GGCGTGGAGA TTGGCGTGGC CTCGACCAAG
GCCTTCACCA CGCAGCTGGC CGGTTTGTTC CTGCTGACGC TCGCCATCGC GCAGACCAAG
GGGCGCCTGA GTGAAGCCGA CGAGGCACGC TACCTGAAGG AGATGCGGCA CCTGCCCGTC
GCGCTGCAAT CGGTGCTCGC GCTCGAGCCG CAGATCATCG GCTGGGCCGA AGACTTCGCG
CGCAAGGACA ACGCGCTCTT CCTCGGCCGC GGCCTGCACT ACCCGATTGC GCTCGAAGGC
GCGCTCAAGC TCAAGGAAGT GACCTACATC CACGCCGAGG CGTACGCCGC CGGCGAACTC
AAGCACGGCC CGCTCGCGCT GGTGACCAGC GAGATGCCCG TGGTGGCCGT GGCACCCAAC
GACACCCTGC TCGAAAAGCT CAAGAGCAAC CTGCAGGAAG TGCGCGCGCG CGGCGGCGTG
CTCTACGTGC TGGCCGACGG CGACACCAGG ATCAAGGGCA GCGAAGGCCT GCATGTGATC
CGCATGCCCG AGCACTACGG CGCGCTCTCG CCGCTGCTGC ACGTGGTGCC GCTGCAATTG
CTGGCCTACC ACACGGCCTG TGCGCGCGGC ACCGATGTCG ACAAGCCGCG CAACCTGGCG
AAGAGCGTGA CGGTGGAGTG A
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| Protein sequence | MCGIVGAASH RNIVPVLVQG LQRLEYRGYD SCGVAVHAGG LTRARTTSRV ADLVTQVREE
HVEGLTGIAH TRWATHGAPA VHNAHPHFSH GPGADAQGAR PGRIALVHNG IIENHETLRA
ALEAKGYVFE SQTDTEVIAH LVDSLYDGDL FEAVKAAVLQ LHGAYAIAVM CRDEPQRVVG
ARAGSPLILG AGKEGGENFL ASDAMALAGV TDQIVYLEEG DVVDLQPGKY WIVDRNHKPV
QRQVRTVQAH SGAAELGPYR HYMQKEIFEQ PRAIADTLEG VAGIVPELFD GIGQDGATGA
SAHRVFKDID KILILACGTS YYSGCTAKYW LESIAKISTQ VEIASEYRYR DSVPDPKTLV
VTISQSGETA DTLAALKHAR SLGMEQTLTI CNVATSAMVR ECKLAYITRA GVEIGVASTK
AFTTQLAGLF LLTLAIAQTK GRLSEADEAR YLKEMRHLPV ALQSVLALEP QIIGWAEDFA
RKDNALFLGR GLHYPIALEG ALKLKEVTYI HAEAYAAGEL KHGPLALVTS EMPVVAVAPN
DTLLEKLKSN LQEVRARGGV LYVLADGDTR IKGSEGLHVI RMPEHYGALS PLLHVVPLQL
LAYHTACARG TDVDKPRNLA KSVTVE
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