| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0994 |
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| Symbol | |
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| ID | 7971965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1092972 |
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| End bp | 1093955 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791590 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942911 |
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| Protein GI | 239814001 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.414086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCATT CGCAAACCCA TCTGCGCTCC CGCCCCATTT CCGCGGGGCA CCTGCGCGCC
TTCGAGGCGG TGGCGCGCCA TCTCAACTTC CGCGCCGCCG CCGAAGAAAT GGCGCTCACC
CAGTCCGCCG TGAGCCGCCA GATCCAGTCG CTCGAGGAAG AAGTGGGCGT GGCGCTGTTC
CTGCGCCACA CGCGGGCGGT GGAGCTCACG AGCGCGGGGG CGCAGCTGCT GCTTGCGGTG
CAGCAGTCGC TGCCGCGCAT CGACACGGCC GTGCGCCAGA TCCGCCAGAG CGCGGGGCGC
AAGAGCGTGT CGCTCACCAC CTTTGCGTCT TTCGCATCGA TGTGGCTGAT CCCGCGGCTC
GAGGCCTTCC AGCGCGACAA CCCCGAGATC GACATCCGCA TCGACGCCAG CGACGTGGCG
GTCGACCTGG AGGTGGCGGA CGTCGACATC GCGCTGCGCT ACGGCACGCG CGAGGTCATG
CCGCCCAACG CCGTGCGCCT GTTCGGCGAA ACGCTCACGC CCGTGGCGAG CCCCTGGCTG
CTCAAGAGCA GCCCGCCCAT CAAGACGCCC GCCGACATCA CCGGCTTCAC GCTGATCGAG
GCCGGCGACG CGCACCGCAC GCACCTCGAA TGGCTGACCT GGCGGCGCTG GTTCGAGGTC
AACGGCCTGG AACGCGCGCA GCCCAGGCGC TGGCTCTATT TCAACTACGC CTACCAGATG
GTGCAGGCCG CGCTCACCGG CCAGGGCGTG ACGCTGGCGC GCAGCTCGCT CATCGCCGAA
AGCCTGGCCA ACGGCGACCT GGTGGAGGTG CTGCCGCAGC ACCGCATGGA TTCGCCGATG
GGCTACTGGC TCATTGCCGG GCCGCGCAAT GCGCTGCGGC CCGAGATCAA GGCCTTCTGG
GACTGGCTGC AGGTGCAGGC CATCACCACG CGCGAGACCA TCGGCGAGGT GCCCGATCCG
GACACCGTCG ACAACATCGA CTGA
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| Protein sequence | MQHSQTHLRS RPISAGHLRA FEAVARHLNF RAAAEEMALT QSAVSRQIQS LEEEVGVALF
LRHTRAVELT SAGAQLLLAV QQSLPRIDTA VRQIRQSAGR KSVSLTTFAS FASMWLIPRL
EAFQRDNPEI DIRIDASDVA VDLEVADVDI ALRYGTREVM PPNAVRLFGE TLTPVASPWL
LKSSPPIKTP ADITGFTLIE AGDAHRTHLE WLTWRRWFEV NGLERAQPRR WLYFNYAYQM
VQAALTGQGV TLARSSLIAE SLANGDLVEV LPQHRMDSPM GYWLIAGPRN ALRPEIKAFW
DWLQVQAITT RETIGEVPDP DTVDNID
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