| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0993 |
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| Symbol | |
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| ID | 7971964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1092348 |
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| End bp | 1092965 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791589 |
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| Product | 5-formyltetrahydrofolate cyclo-ligase |
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| Protein accession | YP_002942910 |
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| Protein GI | 239814000 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
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| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.544063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAGT CAAAGGATGC CGACACCTCG GCGACCACGA GTTTTCTCAA GGATCAGGTG
AGAAAAGCAC TGATCGAGCA GCGCCTGGCG ATGCCCGACC GGCTCGCCAA GGCCGACCTG
CTGCAGCGCG TGATGCGGAT CTGGCTGGTG GGCCGGCCCG ACACCGTGAT CGGCGCCTAC
TGGCCGATCA AGGGCGAGTT CGATCCGCTG CCCGCGCTGC ACCGCTGGAA GGAAGACGGC
GAGCTGATCG ACGAGCCGCA GCGCCGCCGC ATCGGCTTGC CGGTGATGAA CAAGGTCCAC
AAGACGCTGA CCTTCCATGC CTGGTACCCG GGCTGCCAGA TGGAAGAAGA CGCCTACGGC
ATTCCCAAGC CCAAGGACAC CGAGCTGATC GTACCCACGC TGCTGTTCGT GCCCTGCGTG
GGCTACAGCG CCGGCGGCTA CCGGCTGGGC TACGGCGGCG GCTTCTACGA CCGCACGCTG
GCGGCGCTGG AGCCGCGCCC GTTCACGGTG GGGCTGGGCT TCACCAACGG TTTCCTCGAA
GACTTCGAGC CCGAGGCGCA CGATTTGCCG CTGGACGCGA TCCTCAACGA CAACGGCGTG
GTCTGGCCAA CCAGCTGA
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| Protein sequence | MDKSKDADTS ATTSFLKDQV RKALIEQRLA MPDRLAKADL LQRVMRIWLV GRPDTVIGAY
WPIKGEFDPL PALHRWKEDG ELIDEPQRRR IGLPVMNKVH KTLTFHAWYP GCQMEEDAYG
IPKPKDTELI VPTLLFVPCV GYSAGGYRLG YGGGFYDRTL AALEPRPFTV GLGFTNGFLE
DFEPEAHDLP LDAILNDNGV VWPTS
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