Gene Vapar_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0972 
Symbol 
ID7970147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1072451 
End bp1073098 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID644791568 
ProductPhosphoglycerate mutase 
Protein accessionYP_002942889 
Protein GI239813979 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAG CCACCCGCCT GATTGCCGTT CGCCATGGCG AAACCGCCTG GAACGTCGAC 
ACGCGCATCC AGGGCCAGCT CGACATCGGG CTCAACGACA CCGGGCTCTG GCAGGCCCGG 
CGCGTCGGGC AGGCGCTGGC GCACGAGGAC ATCGGCGCGA TCTACGCCAG CGACCTGTCG 
CGCGCCTGGC AGACCGCGCA AGAGATCGCC AGGCCCCACG GCCTCATGGT GCAGCCCGAG 
CCCGGCCTGC GCGAACGCGC CTTCGGCCGC TTCGAGGGCA TGAGCTTTGC CGAGATCGAG 
TCCACCCTGC CCGACCAGGC CCGGCGCTGG CGCGAGCGCG ACCCCGAATT CCAGCCCGAG 
GGCGGCGAGA GCCTGCTGGT CTTTCGCGAG CGGGTGACGC GCATCGCATC GAAACTGGCC 
GCGCGCCATC CGGGCCAGCT GGTGGCGCTG GTGGCGCACG GCGGCGTGAT GGACGTGCTC 
TACCGCGCCG CCACGCGCCA GGAGCTGCAG GCGCCGCGCA CCTGGCAGCT CGGGAACGCC 
GCCATCAACC GCATGCTGTG GACGCCCGAG GGCTTCAGCC TCGTGGGCTG GAGCGATACC 
GCCCACCTGG CGGCGGACGA CGACGTTCTC GACGAGACCA CAACCTAG
 
Protein sequence
MEEATRLIAV RHGETAWNVD TRIQGQLDIG LNDTGLWQAR RVGQALAHED IGAIYASDLS 
RAWQTAQEIA RPHGLMVQPE PGLRERAFGR FEGMSFAEIE STLPDQARRW RERDPEFQPE 
GGESLLVFRE RVTRIASKLA ARHPGQLVAL VAHGGVMDVL YRAATRQELQ APRTWQLGNA 
AINRMLWTPE GFSLVGWSDT AHLAADDDVL DETTT