| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0967 |
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| Symbol | |
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| ID | 7970142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1064554 |
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| End bp | 1065981 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791563 |
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| Product | histidine kinase |
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| Protein accession | YP_002942884 |
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| Protein GI | 239813974 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGC GGCCGTCCAG ACGGGGCTCG TTCCAGCAGC TCCTGCTTTT CGCGTTCCTG
CTGATCACCG CCCTGCTGGT GGGCGTGGCG CTGCGCTCGG TGTTCCAGTA CGACGCGCTC
ATGACCCAGA GCCGCGATGC GGCGGCCCGC GCGTTGCGGC TCTCGGGCGC GGCCCAGTCG
CTGGCCGAGC GCAGTGCCGC CATGGAGCGC GCCGGGCGCC AGTCGCTGGT GCTGAACGAC
GCCGTGCTGC GCCGCCGCTT CGACGATGCC GCGCGCGAAG CGCACCAGGT GCTCGAACGG
CTCGAGCGGA ACGGCCTCGC GCCGTCGGGC ATCGAGCTGT GGCGCGCCCA GCTCGGCGTG
ATCGAGGGGC TCATGAGCGG TAGCGCCGAC AGCGCGCTCT CGCGCGAAAG CGGCATGGCC
ATGCAGTTCC GCGAGCTCGA TTCGCTGAAC ACGAATCTGG CGCAGCAGGC CCAGTTCCTG
ATCGAAATGC AGAACGACGC GCTGGCCAAG CGCATCGAGA ACGCGCGCCG CCGGCTGATG
CGCGAAGTGG TGGCCGCCAG CATCCTGGCG GTGTCGCTGG CGCTGGCTTT CGGCATCTGG
CTCGCGCGTC CTTTCAAGCG GCTGGAGCAC GCCATCGTCG GGCTCGGCCA GAACCGGCTC
GACGAGCCGA TCGACATCCG CGGCCCGGCC GACGTGCGGC GCCTGTCGCA GCAGCTCGAG
TGGCTGCGCC TGCGCCTGAC CGAGCTCGAT GCCGACAAGG CACGCTTCCT GCGCCACGTC
TCGCACGAAC TCAAGACGCC GCTGGCGGCG CTGCGCGAAG GCGTCTCGCT GCTGGAAGAC
GGCGTGACGG GTCCGCTCAA TCCGGCGCAG CTCGAGGTGG CGCAGATCCT GAACCAGAAC
ACCGTTTCGC TGCAGGGCCA GATCGAGGCG CTGCTGCGCT TCAACGCCGC CGCCTTCGAG
GCGCGCGAAC TGCGCCGCGA ACGCACCGAC CTGCTGCCGC TGGTCGAAGA GCAGATCGAG
GCGCAGCGCC TGCAGTGGCA GGCCCACGGC CTGCGCGTCC ATGCCGAGGG CGAGTCGATC
ACGCTCCCGG TGGACCGCGC CAAGCTCGGC ACGGCGGTGG CCAACCTGCT GTCCAACGCG
ATCCGCTATT CGGCGCGCGG CGGCGTCATT TCGATCGTGG TGTCGGGCAC GCCCACCACC
GCGTGCATCG ATATCAACGA TGCCGGCCCG GGTATTGCCG AGGGCGACCG GGACCGGATC
TTCGAGCCTT TCTACAGGGG CGAACGCCAG CCCGAGCATG CCGTCAAGGG CACGGGCATC
GGCCTTTCGA TCGTGCAGGA GTACATTGCT GCCCATGGGG GCCGCATCAC CCTGCTGCCA
GAGGGGCCCG GCGCGCGCTT TCGCATCGAA CTGCCGCGCA CGGCCTGA
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| Protein sequence | MAKRPSRRGS FQQLLLFAFL LITALLVGVA LRSVFQYDAL MTQSRDAAAR ALRLSGAAQS
LAERSAAMER AGRQSLVLND AVLRRRFDDA AREAHQVLER LERNGLAPSG IELWRAQLGV
IEGLMSGSAD SALSRESGMA MQFRELDSLN TNLAQQAQFL IEMQNDALAK RIENARRRLM
REVVAASILA VSLALAFGIW LARPFKRLEH AIVGLGQNRL DEPIDIRGPA DVRRLSQQLE
WLRLRLTELD ADKARFLRHV SHELKTPLAA LREGVSLLED GVTGPLNPAQ LEVAQILNQN
TVSLQGQIEA LLRFNAAAFE ARELRRERTD LLPLVEEQIE AQRLQWQAHG LRVHAEGESI
TLPVDRAKLG TAVANLLSNA IRYSARGGVI SIVVSGTPTT ACIDINDAGP GIAEGDRDRI
FEPFYRGERQ PEHAVKGTGI GLSIVQEYIA AHGGRITLLP EGPGARFRIE LPRTA
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