| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0963 |
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| Symbol | |
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| ID | 7970138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1059981 |
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| End bp | 1061996 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791559 |
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| Product | glucosyltransferase MdoH |
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| Protein accession | YP_002942880 |
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| Protein GI | 239813970 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2943] Membrane glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGA ACGACTTCTC CCAACTGAAC GTGCTGACCG AAGCCGACTT CTCGCACCGC
AGCCCGGTGC GCGAAGAACG CCATCCCAAT TCCGTGACCG CTCCGCCGGT CAACCGCGGC
TCCATGACGC CCCGCCCCTG GCGCGGCTTC TGGAACAGCA TCGGCACAGC CCTGCTGGTC
AAGCTCGGCG CCGGCGGCAA GCCGGAAAGC CAGACCGCCG AAGCCGGCGC CCAGGCCAAG
CAGCCCTGGC AGCGCGCCGC GGCCCAGCGC CGCTTCGCCT TCATGGCGCT CACGCTGCTG
AGCACCGTGA TCGCGTCCGT GCTGTTTGCC GGCGTGCAAC CCGACTACGA CAACGTCTGG
CTCGAATACG GCCAGATCGG CCTGTACGGC CTGCTCTCGG GCTGGGTCGT CACCGGCTTC
GTGACCGCGC TCATGGGCTT CTACGTCTCG GTGCGCGGCG ACAAGCACGC GCTCTCGGTC
AAGCAGGTGG CCCACCACCC GATGAACCCC GAGGCACGCA CCGCGATCAT CATGCCGATC
TGCAACGAGG ACGTGGCCAC CGTGTTCGCC GGCCTGCGCG CCACCTGCGA ATCGGTCGCG
GCCACCGGCC ACGCCAAGCA GTTCGACGTG TTCGTGCTGT CCGACAGCTA CTCGCCCGAA
ACCGCCGCCG CCGAGCGCGC CGCCTGGGAA GACCTGCGCG CCGCGCTGGC CGACAGCCCC
AACCAGCCGC AGGTCGAGGT GTACTACCGC CTGCGCACCC GCCGCACCCA CCGCAAGGCC
GGCAACGTGG CCGACTTCTG CCGCCGCTGG GGCAAGGACT ACCGCTACAT GGTCGTGCTC
GACGCCGACT CCGTGATGAG CGGCGACTGC CTGACCTCGA TGGTCAAGCT GATGGAAGCC
AACCCGACCG CCGGCATCAT CCAGACCGCC ACGCAGGCCA TCGGCCACGT GACGCTGCAT
GCCCGCGCGC AGCAATTCGC CTCCCGCGTG ACGGGCCGCC TGTTCACGCT GGGCATGCAG
TTCTGGCAAC TGGGCGAATC GCACTACTGG GGCCACAACG CGATCATCCG CGTCGAGCCC
TTCATGAAGC ACTGCGCGCT GGCCCCCATC AAGGGCACCG GCGGCATGTC GGGCGGCATC
ATGTCGCACG ACTTCGTCGA AGCTGCGCTG ATGCGCCGCG CCGGCTACAA CGTGTGGCTC
TGCGCCGACC TGGTCGGCAG CTACGAGCAG CAGCCGCCGG ACCTCTTGGC CGAACTGCAG
CGCGACCGCC GCTGGTGCCA GGGCAACCTG CAGAACGCCC GCCTGATGGC CGAGCCCGGC
ATCCACCCGG TGCACCGCGC GATGTTCGTG ACCGGCACCA TGGCCTACGT CTCGGCGCCG
CTGTGGCTCG CATTCCTGAC GCTCGGCACC GCGCTGTGGC TGAGCGGCTC GAGCCTGATC
TCCAGCTGGA GCGTGCTGCC GGCGGAACTG GCCGGCCTGT GGGTCTGGAC CCTGTGCCTC
CTGTTCCTGC CCCGCGTGCT CGGCATCGCG GCCGTGCTGA TGCGCGGCGA GCAGCGCCAG
TACGGCGGCC TGTGGGGCCT GGTGAAGAGC TCGGTGCTCG AAAGCGGCCT GGCCATCGTG
CAGGCGCCGG TTCGCATGCT GGCCCATTCG CTGTTCGTGC TGGTCGCCCT CACCGGCATC
AAGCTCGACT GGAAGTCGCC CCCGCGCGAA GCCGCTGCCG TGCCGTGGAA GGTCGCCGTG
TCGCAGCTCG CTCCCATGAG CGTGGTGGTC GGCGCGCTGG CCCTGGGTGT CGCAATGATC
GATCCGAGCG CGCTGATCTG GCTCATGCCG GTGGGCCTGC CGCTGCTGCT GGCCATTCCG
CTCACGGTGC TGACCAGCCA GATCGCGCTG GGCACCTCGC TGCGCGACCG CGGCTTCCTG
CTGATTCCCG AGGAATCGCG CTCGCCCGCC GTGCTGCGCC GCGCCTGGAT GCATGCGCTT
CGCCTGGCGC GCCCTGCGGC GCTGGCAACG GCCTGA
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| Protein sequence | MKPNDFSQLN VLTEADFSHR SPVREERHPN SVTAPPVNRG SMTPRPWRGF WNSIGTALLV
KLGAGGKPES QTAEAGAQAK QPWQRAAAQR RFAFMALTLL STVIASVLFA GVQPDYDNVW
LEYGQIGLYG LLSGWVVTGF VTALMGFYVS VRGDKHALSV KQVAHHPMNP EARTAIIMPI
CNEDVATVFA GLRATCESVA ATGHAKQFDV FVLSDSYSPE TAAAERAAWE DLRAALADSP
NQPQVEVYYR LRTRRTHRKA GNVADFCRRW GKDYRYMVVL DADSVMSGDC LTSMVKLMEA
NPTAGIIQTA TQAIGHVTLH ARAQQFASRV TGRLFTLGMQ FWQLGESHYW GHNAIIRVEP
FMKHCALAPI KGTGGMSGGI MSHDFVEAAL MRRAGYNVWL CADLVGSYEQ QPPDLLAELQ
RDRRWCQGNL QNARLMAEPG IHPVHRAMFV TGTMAYVSAP LWLAFLTLGT ALWLSGSSLI
SSWSVLPAEL AGLWVWTLCL LFLPRVLGIA AVLMRGEQRQ YGGLWGLVKS SVLESGLAIV
QAPVRMLAHS LFVLVALTGI KLDWKSPPRE AAAVPWKVAV SQLAPMSVVV GALALGVAMI
DPSALIWLMP VGLPLLLAIP LTVLTSQIAL GTSLRDRGFL LIPEESRSPA VLRRAWMHAL
RLARPAALAT A
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