| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0952 |
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| Symbol | |
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| ID | 7970127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1045698 |
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| End bp | 1047041 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791548 |
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| Product | MJ0042 family finger-like protein |
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| Protein accession | YP_002942869 |
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| Protein GI | 239813959 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTCG TCACGCGCTG CCCCGCCTGT GCCACCACCT TCAAGGTGGT GCGCGACCAG
CTTCGCATTT CGGATGGCTG GGTGCGCTGC GGACGCTGCA GTCACGTGTT CGACGCCACG
CTCGACCTGC ACGAGGCGCC CGATGGCCCG CCGGCCGCGA GCGCTGCGCC TCCCCCCGCG
CCGGCACCCG CCGCGCCGAC CGAGCCGCCG TCCTCCTCCG ATGCGATCGA AGACGCGGAT
TTCTTCGACG ACGAACCCGA GGATCGCGAA CCGCCGGAGG CTGCGGCTTC CGAGGCCGAG
CCGCCGCCAA CACCGGAGCC CGTGCCTGCA TCGGCACCTG TCTCCACGCC CGCGCCCACC
TTCGCCTTGC CGGCGCACGG CATCGTCGCC GACGAGCTGT GGACCGACTT CGAAGCCAAC
GAGCCCGAAT GGCGGCCGCC GGCGAGTTCG CTGCCGCCGT TTCCGAACAT CGACCTGAAT
CTGGCGGCCC CGCCTTCGCC GCCGCCCCCG CCCGCACCGC CGTTGCCGGC CCTGCGCCTC
AAGGCGCGCG AGATGGCGGC AACGGCCAGC GAGGAAGACG AAAAGCACGC GCCCGAACAA
GACCGCGACC AGGTGCAGAT GCAAAAGGCG CTGCGCCGGG CCCGCATCAA GTCGGCCAAG
ATTGCGAGCG CCAAGGCGCG CGACGAGCGC GCCGCCGCAA AGATGTCAGC CTCGATGGTG
CGGGAGGCGA GCGAGCCCGA GCCGGGCCTG CTCCCTTCGC CTCTGCCGTC GGTCCGCGGC
GATGCGGAAG ATTCGGAGCG GCTTCCTTTT TCCGACGGCA ACGAGAACTC GGGCCGTGAC
ATTGCGGGTG TCTGGCAGCG GCCTGGGGTG CGGCGCTGGC TCTGGCTGCT GGCCGTGCTT
GCCGTCCTGC TTCTGGTCGT GCAGGTCCTG CGCCACGAAC GCGACGGCAT CGTTGCGCGC
CAGCCGAACC TGCGTCCCGC ATTCGCGGGC CTGTGCCGCG TGACCGGCTG CGAGCTCACC
GCGCTGCGGC AGATCGGCGA CATCGTGATC GAGGGCGCGG CCTTCGCGCG CGAAAAAACC
GGCAACAGCG ACTACCGGCT CAGCTTCACG CTGCGCAATG GCGCGGCCGT TCCCCTGGCC
ATGCCGGCCA TCGAGCTTTC GTTGCTCGAC ACGCAGGAGC GCGCCGTGGT GCGACGCGTG
CTGATGGCGG CGGACTACGG CGCACCGGCG GTGCTTGCGG CGCGCTCCGA CCAGGCCGCG
TCATTGCCGA TGAGCTTGTC GGCAGCGGAG GCGGCCGCGC TGCCGCCCAT TGCAGGCTAC
CGCGTCGAAG CGTTCTATCC TTGA
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| Protein sequence | MSLVTRCPAC ATTFKVVRDQ LRISDGWVRC GRCSHVFDAT LDLHEAPDGP PAASAAPPPA
PAPAAPTEPP SSSDAIEDAD FFDDEPEDRE PPEAAASEAE PPPTPEPVPA SAPVSTPAPT
FALPAHGIVA DELWTDFEAN EPEWRPPASS LPPFPNIDLN LAAPPSPPPP PAPPLPALRL
KAREMAATAS EEDEKHAPEQ DRDQVQMQKA LRRARIKSAK IASAKARDER AAAKMSASMV
REASEPEPGL LPSPLPSVRG DAEDSERLPF SDGNENSGRD IAGVWQRPGV RRWLWLLAVL
AVLLLVVQVL RHERDGIVAR QPNLRPAFAG LCRVTGCELT ALRQIGDIVI EGAAFAREKT
GNSDYRLSFT LRNGAAVPLA MPAIELSLLD TQERAVVRRV LMAADYGAPA VLAARSDQAA
SLPMSLSAAE AAALPPIAGY RVEAFYP
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