| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0936 |
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| Symbol | |
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| ID | 7970111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1028489 |
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| End bp | 1029340 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791532 |
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| Product | TonB family protein |
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| Protein accession | YP_002942853 |
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| Protein GI | 239813943 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.408733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCA GGGATCTGAG CACGCTGCAG ATCGCACTCG GCGTGTCGGT CATCGCGCAT
GCCGCACTTC TTGCGGTGCG CTTCGTCGAT CCCGAATCAT TCAACCGGGT CTTCAGCGAA
ACACCGCTCG AGGTGATCCT GGTCAACAGC AAGACCAACG ACAAGCCCGA CGCCAGGGCC
CGCGTGATGG CCCAGACCTC GCTCGCGGGC GGCGGCGACC TCGAACGCGG CCGCGCCACC
AGCCCGCTGC CGCCGTCGAG CTTCACCGCC GTCGGCGACT CGATCGAGGA GGCCCGGCGC
CAGGTCGAGG CCATGCAGGC CCAGCAGATG CAGCTGCTCG CGCAGCTCAA GCGCGAGCTG
GCCGCCATGC CCGCGCCGGA CCCGCGCGCC TCGGGCGACC CGAAGGAGGC CGTGGCCCGC
GAGGAAAAGC GCCGCCAGAT GGTGGAGCTG CTGGCCGAGA TCGAGCGCCG CGTGAACGAA
GAGAACGCGC GCCCCAAGAA GCGCTACCTG AGCCCTTCCA CGCGCGAGGC GGCCTACGCC
ATCTACGTGG ACACGCTGCG CCGGCGCATC GAAGTGCGGG GCACCGAGAA CTTCCCCACG
GCGGCCGGCA AGAAGCTCTA CGGCGAGCTC AAGATGACGA TCACCATCAA CCACGACGGC
AAGATCCTCG ACACCGTGGT CGACGAAAGC TCGGGCGACG TCGTGCTCGA CCGCCGCGCC
AAGGCCATCG TGCACAGCAT CGGCAGCTTC GGCAAATTCA CCGATGCGAT GCGAAAAGAG
ACCGACCAGA TCGTGCTGCA GTCGCGCTTC AAGTTCACGC GCGACGAGAC CATCGAGCTC
TCCTCCCAAT AG
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| Protein sequence | MNFRDLSTLQ IALGVSVIAH AALLAVRFVD PESFNRVFSE TPLEVILVNS KTNDKPDARA
RVMAQTSLAG GGDLERGRAT SPLPPSSFTA VGDSIEEARR QVEAMQAQQM QLLAQLKREL
AAMPAPDPRA SGDPKEAVAR EEKRRQMVEL LAEIERRVNE ENARPKKRYL SPSTREAAYA
IYVDTLRRRI EVRGTENFPT AAGKKLYGEL KMTITINHDG KILDTVVDES SGDVVLDRRA
KAIVHSIGSF GKFTDAMRKE TDQIVLQSRF KFTRDETIEL SSQ
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