| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0934 |
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| Symbol | |
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| ID | 7970109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1026870 |
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| End bp | 1027613 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791530 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_002942851 |
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| Protein GI | 239813941 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGC TGCTGCGGCT GGTGGCCTGC CTGCTGGTGG CGGGCGTGGC ACTGGAGCTT
TTCTTCGTGG GGCGCATCGC GGCCATGGCG GTGATCGATC CGCAGAGCAC CGCGTTCCAG
CGCAGCGAAG CCTGGCAGAT CGCCATCCAC CAGGGCCGCA AGGGTGCCTG GCGCCAGGAA
TGGGTGCCCT ACGCGCAGAT CAGCGACAAC CTCAAGCGCG CCGTCATCGC GAGCGAAGAC
GCCGACTTCA TCGACCACAA CGGCGTGGAA TGGGAAGCCA TCGAGCGGGC GCGCCAGCGC
AATGCCAAGG CCGAGGAACT CGCGGCCCGG CGTGCGGCTC GCGCCATCGC ACGCGGCAAA
CCGGTGCGGC CGGTCCAGCT GCGCGGCGGC TCCACCATCA CGCAGCAGCT TGCGAAGAAC
CTGCTGCTCT CCGGCGAGCG CACGCTGCTG CGCAAGGGCC AGGAACTGGC GCTCGCGATG
GCGCTCGAGG TGCTGCTCGA CAAGCGGCGC ATCCTCGAGA TCTACCTCAA CAACGTCGAA
TGGGGCGAAG GCGTGTTCGG CGCCGAGGCG GCGGCCCAGT ACTACTTCAG GAAGCCCGCC
TCGCGCCTGA GCGCCGCCGA AGCCGCGCGC CTTGCCGTGA TGCTGCCGAG CCCCAAGTTC
TTCGAGCGCC GCACCGGCTC GTCCTACCTC AGCGGACGGG CCTCGACGAT CGTGGCGCGG
ATGCCGTCGG CCGAACTGCC CTGA
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| Protein sequence | MKRLLRLVAC LLVAGVALEL FFVGRIAAMA VIDPQSTAFQ RSEAWQIAIH QGRKGAWRQE
WVPYAQISDN LKRAVIASED ADFIDHNGVE WEAIERARQR NAKAEELAAR RAARAIARGK
PVRPVQLRGG STITQQLAKN LLLSGERTLL RKGQELALAM ALEVLLDKRR ILEIYLNNVE
WGEGVFGAEA AAQYYFRKPA SRLSAAEAAR LAVMLPSPKF FERRTGSSYL SGRASTIVAR
MPSAELP
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