Gene Vapar_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0932 
Symbol 
ID7970107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1025599 
End bp1026435 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID644791528 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_002942849 
Protein GI239813939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.871455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCACCG GCGCCCAGGC GCGCTGGTAC GGCTGCCCGC CAAAGGCCGA GCAGCGCATC 
TATTTCGCCA ACCACCAGAG CCACGCCGAC CTCGTGATGA TCTGGGCGGC CCTGCCCGAG
GAACTGCGCA GCATCACGCG GCCGATTGCG GCGCGCGACT ACTGGGCCAA TACGCCCGTC
AAGCGCTGGA TCACGACCGA GGTGTTCAAC GCGGTGTATG TGGAGCGCGC GGCGACGGCG
ACGGCCGCGC CTGCCGCAGC GCCGGCGGAA CCCGAAGCGC CCCCGCCGCC CGTGCGAGCT
GCCGCCACCG CGCCGCAGCC CGAGCGCATC GAACCCTCGA TGGAGCCCCT GCTGCCGCTG
GCGCCCATGG CACCGCCTGT CGTCGACATC ACCCCCGAAG CCTTCGACGA AGTGCAAGGC
CGGCTCGACC TTCCCGCTCC GCCGCCACCG CCACCACCGG CCGCGCCGCC CGTCGCACCG
CCAGCCGTCG AGCCGGAGCC GCCCACGCCC GCCTCCGACC CGCTGGCGCC GCTGGTCGAG
GCACTGCGCA GCGGCGACTC GATCATCATC TTTCCCGAAG GCACGCGCGG CCACACGGGA
GAGCCGCAGA AGTTCAAGTC GGGCCTCTAC ACGCTCGCGA CGATGTTTCC CGAGGTGGTG
CTGGTGCCGG CATGGATCGA CAACGTGCAG CGCGTGATGC CCAAGGGCGA GATCGTGCCG
GTGCCGATCC TGTGCTCCGT CACCTTCGGC GCGCCGATCC GCGTCGAGGA AGGCGAAGAG
CGCCGGCCGT TCCTCGATCG CGCCCGTGCC GCGGTGATTG CATTGCGCGA TGTCTGA
 
Protein sequence
MLTGAQARWY GCPPKAEQRI YFANHQSHAD LVMIWAALPE ELRSITRPIA ARDYWANTPV 
KRWITTEVFN AVYVERAATA TAAPAAAPAE PEAPPPPVRA AATAPQPERI EPSMEPLLPL
APMAPPVVDI TPEAFDEVQG RLDLPAPPPP PPPAAPPVAP PAVEPEPPTP ASDPLAPLVE
ALRSGDSIII FPEGTRGHTG EPQKFKSGLY TLATMFPEVV LVPAWIDNVQ RVMPKGEIVP
VPILCSVTFG APIRVEEGEE RRPFLDRARA AVIALRDV