Gene Vapar_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0930 
SymbolruvC 
ID7970105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1023808 
End bp1024356 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID644791526 
ProductHolliday junction resolvase 
Protein accessionYP_002942847 
Protein GI239813937 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.515185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTC TCGGCATCGA CCCCGGCCTC CTGACCACCG GTTTCGGCGT GGTCGATTCG 
GACGGCCATG CGCTGAGCTA CGTGGCCAGC GGCACCATCA GCACGCGCCA CCTGGGCAGC
GGCAACCTGC CGGCGCGGCT CAAGGTGCTG TTCGACGGCA TCGCGGAAAT CGCCGCGCGC
TACCAGCCCG ATGCCTCGGC GGTCGAGATC ATCTTCGTCA ACGTCAATCC GCAGTCGACG
CTGCTGCTGG GCCAGGCGCG CGGCGCCTGC GTGACCTCGC TGGTCAACAG CAATCTCAGC
GTGGCCGAAT ACACCGCGCT GCAGATGAAG AAGGCAGTGG CGGGCCACGG CCAGGCCGCC
AAGGCGCAGG TGCAGGAGAT GGTGAAGCGG CTGCTCGACC TGCCGGGCCT GCCGGGCGCC
GATGCCGCCG ACGCGCTGGG CATTGCCATC ACGCATGCGC AGGTCGGCCG GTCGATGGCG
CGGCTGGCCG AGGCGGCCGA GCTGTCGAAG ACGCACGCCG GCACCTACCG GCAGGGACGC
TCGCGCTGA
 
Protein sequence
MRILGIDPGL LTTGFGVVDS DGHALSYVAS GTISTRHLGS GNLPARLKVL FDGIAEIAAR 
YQPDASAVEI IFVNVNPQST LLLGQARGAC VTSLVNSNLS VAEYTALQMK KAVAGHGQAA
KAQVQEMVKR LLDLPGLPGA DAADALGIAI THAQVGRSMA RLAEAAELSK THAGTYRQGR
SR