Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0930 |
Symbol | ruvC |
ID | 7970105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1023808 |
End bp | 1024356 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644791526 |
Product | Holliday junction resolvase |
Protein accession | YP_002942847 |
Protein GI | 239813937 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.515185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTC TCGGCATCGA CCCCGGCCTC CTGACCACCG GTTTCGGCGT GGTCGATTCG GACGGCCATG CGCTGAGCTA CGTGGCCAGC GGCACCATCA GCACGCGCCA CCTGGGCAGC GGCAACCTGC CGGCGCGGCT CAAGGTGCTG TTCGACGGCA TCGCGGAAAT CGCCGCGCGC TACCAGCCCG ATGCCTCGGC GGTCGAGATC ATCTTCGTCA ACGTCAATCC GCAGTCGACG CTGCTGCTGG GCCAGGCGCG CGGCGCCTGC GTGACCTCGC TGGTCAACAG CAATCTCAGC GTGGCCGAAT ACACCGCGCT GCAGATGAAG AAGGCAGTGG CGGGCCACGG CCAGGCCGCC AAGGCGCAGG TGCAGGAGAT GGTGAAGCGG CTGCTCGACC TGCCGGGCCT GCCGGGCGCC GATGCCGCCG ACGCGCTGGG CATTGCCATC ACGCATGCGC AGGTCGGCCG GTCGATGGCG CGGCTGGCCG AGGCGGCCGA GCTGTCGAAG ACGCACGCCG GCACCTACCG GCAGGGACGC TCGCGCTGA
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Protein sequence | MRILGIDPGL LTTGFGVVDS DGHALSYVAS GTISTRHLGS GNLPARLKVL FDGIAEIAAR YQPDASAVEI IFVNVNPQST LLLGQARGAC VTSLVNSNLS VAEYTALQMK KAVAGHGQAA KAQVQEMVKR LLDLPGLPGA DAADALGIAI THAQVGRSMA RLAEAAELSK THAGTYRQGR SR
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