| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0923 |
|---|
| Symbol | |
|---|
| ID | 7970098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 1016908 |
|---|
| End bp | 1018137 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644791519 |
|---|
| Product | cell division protein FtsA |
|---|
| Protein accession | YP_002942840 |
|---|
| Protein GI | 239813930 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0849] Actin-like ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR01174] cell division protein FtsA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0104805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAG AATACAAAGA CCTGGTTGTC GGACTCGACA TCGGAACCGC CAAGGTGATG
GTGGTCGTCG CCGAGGTGCT GCCCGGCGGC GAACTCAAGC TCGCGGGGCT CGGCATCGCG
CCGAGCAACG GCCTCAAGCG CGGCGTGGTG GTGAACATCG ACGCCACGGT GCAGAGCATC
CAGCAGGCCT TGAAGGAGGC CGAGCTGATG GCCGATTGCA AGATCAGCCG CGTCTACACC
GGCATCACCG GCAGCCACAT CCGCGGCATC AATTCGAGCG GCATGGTGGC GGTGAAGGAC
AAGGAAGTCA CGCCTGCCGA CGTGGCCCGC GTGGTGGAGA CCGCGCGCGC CATCAACATC
TCGAGCGACC AGCGCCTGTT GCTGGTGGAG CCGCAGGAGT TCGTGATCGA CGGCCAGGAC
GTGAAGGAGC CGATCGGCAT GAGCGGCATG CGGCTGGAGG CCAAGGTGCA CATCGTGACC
GGCGCCCAGA GCGCGGCCGA GAACATCATC AAGTGCGTGC GCCGCTGCGG CCTCGAAGTT
GACCAGCTGA TGCTCAACCC GCTGGCCTCG AGCCAGGCGG TGCTGACCGA GGACGAGCGC
GAGCTCGGCG TGGTGCTGGT GGACATCGGC GCGGGCACCA CCGACGTGGC CATCTTCACC
AACGGCGCGA TCCGCCACAC GGCGGTGATC CCGATCGCGG GCGACCTCAT CACCAGCGAC
ATCGCGATGG CGCTGCGCAC GCCCACCAAG GACGCCGAAG ACATCAAGGT CGAGAACGGC
TACGCCAAGC AGCTCCTGGC CGATCCCGAC ACGCAGGTGG AAGTGCCCGG CCTGGGCGAC
CGCGGCCCGC GCATGCTGAG CAAGCAGGCG CTGGCCGGCG TGATCGAGCC GCGCATCGAG
GAGATCTTCT CGCTGGTGCA GCAGGTGGTG CGCGAGTCGG GCTACGAAGA AGTGCTCTCT
TCGGGCGTGG TGCTCACGGG CGGTAGCGCC GTGATGCCCG GCATGGTGGA GCTCGGCGAG
GACATCTTCC TGAAGCCGGT GCGCCGCGGC ATTCCGAAGT ATTCGAGCGC GCTCTCCGAC
ATGGTGGCGC AGCCGCGCGC GGCCACCGTG ATGGGCCTGC TCGAGGAAGC GCGCTTCGCA
CGCATGCGCG GCTTCAAGGT GGCGCAGAAG AACGGGTCCG TAAAGACTGC GTTCGGACGT
TTCAAGGACT TCATCGTGGG GAACTTCTGA
|
|---|
| Protein sequence | MPKEYKDLVV GLDIGTAKVM VVVAEVLPGG ELKLAGLGIA PSNGLKRGVV VNIDATVQSI
QQALKEAELM ADCKISRVYT GITGSHIRGI NSSGMVAVKD KEVTPADVAR VVETARAINI
SSDQRLLLVE PQEFVIDGQD VKEPIGMSGM RLEAKVHIVT GAQSAAENII KCVRRCGLEV
DQLMLNPLAS SQAVLTEDER ELGVVLVDIG AGTTDVAIFT NGAIRHTAVI PIAGDLITSD
IAMALRTPTK DAEDIKVENG YAKQLLADPD TQVEVPGLGD RGPRMLSKQA LAGVIEPRIE
EIFSLVQQVV RESGYEEVLS SGVVLTGGSA VMPGMVELGE DIFLKPVRRG IPKYSSALSD
MVAQPRAATV MGLLEEARFA RMRGFKVAQK NGSVKTAFGR FKDFIVGNF
|
|---|
| |