| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0909 |
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| Symbol | hslU |
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| ID | 7970084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 999939 |
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| End bp | 1001267 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791505 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_002942826 |
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| Protein GI | 239813916 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGA CCCCGCAGGA AATCGTCTCC GAGCTCGACA ACCACATCGT CGGCCAGCCC
GCCGCCAAGC GCGCCGTGGC CATTGCGCTG CGCAACCGCT GGCGCCGCCA GCAGGTCGAG
GAAAAGCTGC GCACCGAGAT CACGCCCAAG AACATCCTCA TGATCGGCCC CACGGGCGTG
GGCAAGACCG AGATCGCGCG CCGCCTCGCG CGCCTGGCGG ATGCGCCGTT CATCAAGGTC
GAGGCCACCA AGTTCACCGA GGTGGGCTAT GTCGGCAAGG ACGTCGATTC GATCGTTCGC
GACCTGGCCG AGATCGCCGT CAAGCAGACG CGCGAGGCCG AAAGCGCCAA GGTGCGCGCG
CGTGCCGAGG ACGCCGCCGA AGACCGCATC CTCGACGTGC TGCTGCCGCC TGCGCGCGGT
GCCGAGGGCG CCACGCCGGC GCTGGACGGC CCCAACCCCA CCCGCCAGGC CTTCCGCAAG
AAGCTGCGCG AGCACCAGCT CGACGACAAG GAAATCGAAC TCGACCTGGC CGAAGCCCGC
GCGCCGCTCG AGATCATGGG CCCGGCCGGC ATGGAGGAAA TGACCGAGCA GCTGCGCGGC
ATGTTCGGCC AGCTCGGCGG CGGCAAGCGC AAGACGCGCA AGCTCAAGAT CGCCGAGGCG
ATGCGCCTCC TGATCGACGA GGAAGCCGCC AAGCTGGTCA ACGAGGACGA GATCCGCACC
CAGGCCATCA CCAACGCCGA GCAGAACGGC ATCGTCTTCA TCGACGAGAT CGACAAGGTC
GCCACGCGCA GCGAGGCCCA GGGCTCCGAC GTGTCGCGCC AGGGCGTGCA GCGCGACCTG
CTGCCGCTGG TCGAGGGCAC GGCCGTGAGC ACCAAGTACG GCGTGGTGCG CACCGACCAC
ATGCTCTTCA TCGCGAGCGG GGCCTTCCAC CTGAGCAAGC CGAGCGACCT GATCCCCGAG
CTGCAGGGGC GCTTTCCGAT CCGCGTCGAG CTGCAGTCGC TCTCGGTGTC CGACTTCGAA
AGCATCCTCA CGCAGACCCG CGCTTCGCTC GTGAAGCAGT ACCAGGCGCT GCTCGCCACC
GAGGGCGTCA CGCTCGAATT CACGCCCGAA GGCGTGAACC GCCTGGCCAC CATCGCGTAC
GAGGTCAACG AGCGCACCGA GAACATCGGC GCACGCCGTT TGTCGACCGT GATGGAGCGT
CTGCTGGATG AGGTAAGCTT CGACGCGACC CGCATCGAGG GGCAGACCAT CCGCATCGAT
GCCGCCTATG TCGACGAGCG CCTTGCGGCA CTAAGTCACG ACGAAGATCT TTCGCGCTTC
ATCCTCTGA
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| Protein sequence | MSMTPQEIVS ELDNHIVGQP AAKRAVAIAL RNRWRRQQVE EKLRTEITPK NILMIGPTGV
GKTEIARRLA RLADAPFIKV EATKFTEVGY VGKDVDSIVR DLAEIAVKQT REAESAKVRA
RAEDAAEDRI LDVLLPPARG AEGATPALDG PNPTRQAFRK KLREHQLDDK EIELDLAEAR
APLEIMGPAG MEEMTEQLRG MFGQLGGGKR KTRKLKIAEA MRLLIDEEAA KLVNEDEIRT
QAITNAEQNG IVFIDEIDKV ATRSEAQGSD VSRQGVQRDL LPLVEGTAVS TKYGVVRTDH
MLFIASGAFH LSKPSDLIPE LQGRFPIRVE LQSLSVSDFE SILTQTRASL VKQYQALLAT
EGVTLEFTPE GVNRLATIAY EVNERTENIG ARRLSTVMER LLDEVSFDAT RIEGQTIRID
AAYVDERLAA LSHDEDLSRF IL
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