| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0902 |
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| Symbol | |
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| ID | 7970077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 991177 |
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| End bp | 992247 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791498 |
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| Product | integrase family protein |
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| Protein accession | YP_002942819 |
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| Protein GI | 239813909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACCT CCACTGAGAC GGCGGGGACC GGCTGGGTCG ACAAGTACCT GGAGCATGTG
CGCGTCGAGC GCCGGCTGGC GGCGCGCACG GTCGAGCTCT ACGCCATCCA CCTGCAGGCG
CTCGCGGCCA ACGCCGCCGA GGCCGGGCTC CCGCTCGACC GCGTGCAGAC CGCGCACATC
CGGCGCTGGA TGGCGCAGCT GCACGGCGCG GGACGCGAGC CGCGCGGCAT TGCGCTGGTG
CTCTCGTGCT GGCGCAGCTT CTACCGCTGG CTCGGCAACG AGGGGCTGGT GGGCTTCAAC
CCCGTGAAGG ACGTGCATGC ACCCAAGGCC GCGCGGCCGC TGCCCAAGGC GCTGGCGGTC
GACGACGCGG TGCGGCTCGC CGAACTCTAC GACCCCGAGG CCGACCCCTG GACCGAGGCG
CGCGACGGCG CGATCGTCGA GGTGCTCTAC GGCTGCGGCC TGCGCGTGAG CGAGCTCACC
GGCCTCGATG CGCGCGCCAG CAATACGGCC CGCGGCTGGG TCGATCTCGA TGCGCTGGAA
GCCAACGTGC TCGGCAAGGG CAGCAAGCGG CGCATCGTGC CGATCGGCAG CAAGGCGGCC
GAGGCGCTGC GCGACTGGTT CGCGGTGCGC GGCGAATGCG CGGCGCTGTC GACGGCCGCG
CTGCGCGACC CGGCGGGCGC GGCGGCGCTC TTCATCAGCG CCAAGGGCGT GCGCATGTCC
TCGCAGGCCG TGTGGAAGCT GCTGCGCGAG CGCAGCCTCA AGGCCGGCCT TGCGGCGCCC
GTGCATCCGC ACATGCTGCG GCACTCGTTC GCAAGCCATG TGCTGCAGTC GAGCAGCGAC
CTGCGCGCGG TGCAGGAACT GCTGGGCCAC GCGAACATCG CCACCACGCA GGTCTATACG
CGGCTGGACT TCCAGCACCT GGCCAAGGTG TATGACGCGG CACATCCGCG CGCGCAGGCG
CGCCCCGAGG GCACGCGCGC GCAGCCGCGC CCCGAGGGCA CGCGCGCGCA GCCGCGCCCC
GAAGGCGCAC GCGCCAAGCC GAAGAACGAC GACAACAAGC CAACCAAATA A
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| Protein sequence | MATSTETAGT GWVDKYLEHV RVERRLAART VELYAIHLQA LAANAAEAGL PLDRVQTAHI
RRWMAQLHGA GREPRGIALV LSCWRSFYRW LGNEGLVGFN PVKDVHAPKA ARPLPKALAV
DDAVRLAELY DPEADPWTEA RDGAIVEVLY GCGLRVSELT GLDARASNTA RGWVDLDALE
ANVLGKGSKR RIVPIGSKAA EALRDWFAVR GECAALSTAA LRDPAGAAAL FISAKGVRMS
SQAVWKLLRE RSLKAGLAAP VHPHMLRHSF ASHVLQSSSD LRAVQELLGH ANIATTQVYT
RLDFQHLAKV YDAAHPRAQA RPEGTRAQPR PEGTRAQPRP EGARAKPKND DNKPTK
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