Gene Vapar_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0901 
Symbol 
ID7970076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp990588 
End bp991193 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID644791497 
Productprotein of unknown function DUF218 
Protein accessionYP_002942818 
Protein GI239813908 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGCCCG TGCTGTGGAC GGTGCTGCTG GCCGGACTGC TGGCCTACCT CGTCATTGCC 
GCCGTCATCT GGCGGCGCGC GGCCGAGGCG CTGGCCAACC CGCCCCAGCG GCCGGCCGAT 
GCCGCGCTGG TCCTGGGCAA CCGCGCCTTC CTCGATGGCA AGCCCAATCC CTGCCTGACG 
GGCCGGGTCG ATGCCGCCAT CGCGCTGGCC GATGCGGGCC TCGCGAAGCA GCTCGTGCTG 
TCGGGCGGCG TCGACAAGGA AGACGGCCGC ATCGAGGCCG AGGTGATGCA GCGGCATGCG 
CGCGCCCAGG GCTATGCCGG GCCGCTGCTG CTGGAGCCGG CATCGACCTC GACCCGCCTG 
AATCTTGCGA TGTCGCGTCC GCTGCTGAAG GCGGCCGGCA TCCATGGCGT GATCGTGGTG 
TCGGAGCCCT ACCACCTGTG GCGCGTGGAG CGCCTCGCGC GGGCCAGCGG TTTCGACAAG 
GACTTCGACG TCCAGTACGC GGCGGCGAGC ACGCGCTGCT GGCGCCGCTG GGGCATGGTC 
TTCAAGGGTG CGTTGCGCGA GCCTCTGGCT GTCGTGAACA ATGCGTTCAA TGGCTACCTC 
CACTGA
 
Protein sequence
MRPVLWTVLL AGLLAYLVIA AVIWRRAAEA LANPPQRPAD AALVLGNRAF LDGKPNPCLT 
GRVDAAIALA DAGLAKQLVL SGGVDKEDGR IEAEVMQRHA RAQGYAGPLL LEPASTSTRL 
NLAMSRPLLK AAGIHGVIVV SEPYHLWRVE RLARASGFDK DFDVQYAAAS TRCWRRWGMV 
FKGALREPLA VVNNAFNGYL H