Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0901 |
Symbol | |
ID | 7970076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 990588 |
End bp | 991193 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791497 |
Product | protein of unknown function DUF218 |
Protein accession | YP_002942818 |
Protein GI | 239813908 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGCCCG TGCTGTGGAC GGTGCTGCTG GCCGGACTGC TGGCCTACCT CGTCATTGCC GCCGTCATCT GGCGGCGCGC GGCCGAGGCG CTGGCCAACC CGCCCCAGCG GCCGGCCGAT GCCGCGCTGG TCCTGGGCAA CCGCGCCTTC CTCGATGGCA AGCCCAATCC CTGCCTGACG GGCCGGGTCG ATGCCGCCAT CGCGCTGGCC GATGCGGGCC TCGCGAAGCA GCTCGTGCTG TCGGGCGGCG TCGACAAGGA AGACGGCCGC ATCGAGGCCG AGGTGATGCA GCGGCATGCG CGCGCCCAGG GCTATGCCGG GCCGCTGCTG CTGGAGCCGG CATCGACCTC GACCCGCCTG AATCTTGCGA TGTCGCGTCC GCTGCTGAAG GCGGCCGGCA TCCATGGCGT GATCGTGGTG TCGGAGCCCT ACCACCTGTG GCGCGTGGAG CGCCTCGCGC GGGCCAGCGG TTTCGACAAG GACTTCGACG TCCAGTACGC GGCGGCGAGC ACGCGCTGCT GGCGCCGCTG GGGCATGGTC TTCAAGGGTG CGTTGCGCGA GCCTCTGGCT GTCGTGAACA ATGCGTTCAA TGGCTACCTC CACTGA
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Protein sequence | MRPVLWTVLL AGLLAYLVIA AVIWRRAAEA LANPPQRPAD AALVLGNRAF LDGKPNPCLT GRVDAAIALA DAGLAKQLVL SGGVDKEDGR IEAEVMQRHA RAQGYAGPLL LEPASTSTRL NLAMSRPLLK AAGIHGVIVV SEPYHLWRVE RLARASGFDK DFDVQYAAAS TRCWRRWGMV FKGALREPLA VVNNAFNGYL H
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