| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0896 |
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| Symbol | |
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| ID | 7970071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 986917 |
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| End bp | 987855 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791492 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942813 |
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| Protein GI | 239813903 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATC TGAACCGTTT CGATCTCACT TCCCTGCGGC TTTTTGTCGC GGTCGTCGAT
GGTGGAAGCC TGACCGCGGG CGCGGATCGA TTCGGCGTAT CGCTTCCGGC GGCCAGCAAG
CGCATCACCG ATCTCGAGCA GCACTGCGGC ATGGCGCTGC TCCAGCGCGG CCAACGCGGC
GTGACCGCCA CGCCGGAAGG ACAGACCCTG CACCGGCACG CGATCGAGGT GATCGCACGC
CTGGAACAGC TGGTGCAGGC GGTCGACGAT CTTCAATCCG GTGCCACCGG CCACCTGCGG
CTGTGCGCCA ATCCTTCCGC TTTCGGCGGC TTCCTGCCCA GCGTGCTGGC CGAGTACGCC
CGCCGCTATC CGCAGGTGGT GATCGACATG GAAGATGCCC TGAGCGAAGA CGGCATCCGC
GCCGTGCAGA AAGGCACGGC GGAACTGGCC GTCATCGGCG ACAACGTGCC GCACGACGGC
CTGGAGACTC TCGTCTGCAA TGTCGACCAG CTGGTGCTGC TGGTGCCGGC GGGCCATGCG
CTGGACGGCC GGCAGAACGC CTGCCTCGCG GACGTGCTCG ACCACGACCT GGTCACGCTG
GCACGCAGCG CATCGCTCAC GCGCAAGGTG ATGGCGGCGG CCGACGCGGC CAAGCGCACG
CCGCGCATCC GGGTGCAGGT GCGCAGCTTC GATTCGATGT GCCGCATGGT CTCGTTCGGG
CTTGGCCTGG CGATCCTGCC GCGCGCGGCG GCGGCGCTCT ATGCCCAGGC CCTCGGCCTG
GTGCAGGTCG GCCTTGAAGG CATCGAGATG GAACGCGTGC TGCTGCTGGC CATGCGCAGC
CGCGCGGAAC TCTCGACGCC GGCGGCTGCC CTGGTGGACA TGATCGAAAG TGCGGTGCCC
TTCAGCGAAG CACGGCACTC TCCGAGGCCT GGCGAATGA
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| Protein sequence | MINLNRFDLT SLRLFVAVVD GGSLTAGADR FGVSLPAASK RITDLEQHCG MALLQRGQRG
VTATPEGQTL HRHAIEVIAR LEQLVQAVDD LQSGATGHLR LCANPSAFGG FLPSVLAEYA
RRYPQVVIDM EDALSEDGIR AVQKGTAELA VIGDNVPHDG LETLVCNVDQ LVLLVPAGHA
LDGRQNACLA DVLDHDLVTL ARSASLTRKV MAAADAAKRT PRIRVQVRSF DSMCRMVSFG
LGLAILPRAA AALYAQALGL VQVGLEGIEM ERVLLLAMRS RAELSTPAAA LVDMIESAVP
FSEARHSPRP GE
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