Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0891 |
Symbol | |
ID | 7972107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 978904 |
End bp | 979668 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644791487 |
Product | IstB domain protein ATP-binding protein |
Protein accession | YP_002942808 |
Protein GI | 239813898 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGA CCGAGATCGA ACGCGCCCTG CGCGAGCTGC GCCTGTCCGG CATCGCCGAC ACGCTGTCCA CCCGCGTGAT GCAGGCCCAG GCCGCCCAGC AGCCCTTCCT GGAGACGTTG GCCGCCATGC TGCAAGACGA ACTCGACCGG CGCCGCTCGC GATTGATGGA GCGCCGCTTC AAGCGCTCAG GCCTGGCCGA ACGCCTGACG CTGGCGGACT TCGACTGGCG CTTCAATCCC AAGCTGCCGC GCAACGCCTG CTTCGAGCTG CACACCCTGA AGTTCATCGG CGAGGGGGCC AACGCATTGA TCGTCGGCAA GCCCGGCACC GGCAAGAGCC ATGTGGCCAA GGCGGTGGCC TACCAGGCCA CGTTGGCCGG CTATGACGTG CGCTACGTGG AGGCCGACAC CGAGTTCGCC CGATATGGGC TGGCCAGCAC GGCGCAGCAG GCCGAACAGC TCAAGGGCTG GATCGAGCCG GACCTGTTGG TCCTTGATGA CCTGTTCCTG GCCCGGCGCA TTGCCGACGT GAGCGCCGAA CTCTTGCAGG CCATCGTGCA CCAGCGCTAC AAGCTGCGTC GCGCCATCGT CATCACCTCC AACCGGGTGG TGCAGGACTG GGGAAAGTAC CTCGCCGACG CCACCATGGC CACCACCATC CTGGACCGGC TCATGCACCG CTGCGCAATG CTGGAGTTCG AGGGCAAAAG CTACCGCCTG AAGGAGGCCG CCGCGCGCAT CGCCATCACG CCCGAATCGT CATAA
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Protein sequence | MNMTEIERAL RELRLSGIAD TLSTRVMQAQ AAQQPFLETL AAMLQDELDR RRSRLMERRF KRSGLAERLT LADFDWRFNP KLPRNACFEL HTLKFIGEGA NALIVGKPGT GKSHVAKAVA YQATLAGYDV RYVEADTEFA RYGLASTAQQ AEQLKGWIEP DLLVLDDLFL ARRIADVSAE LLQAIVHQRY KLRRAIVITS NRVVQDWGKY LADATMATTI LDRLMHRCAM LEFEGKSYRL KEAAARIAIT PESS
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