| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0886 |
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| Symbol | |
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| ID | 7972102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 973257 |
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| End bp | 974198 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791482 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002942803 |
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| Protein GI | 239813893 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTTC CGTCCGTTGC CGACAACAAG CCCGAGGTCA TTCCCGCCGC CGCCTGGGCC
CGCCTGCGCG ACATGGTCGC AGCGCGAACC TCCGCGGACG GGCGTACTGA CGCGCTGTAT
CCGGGGCTGC GCTGCTACCG CTTCTCGCGC CCGGTCCGCT ACGAGAAAAC CCAGCGCCTC
ACGCCGGGCG TGGTGGTGGT CCTGCAGGGC CGCAAGACGG CGCATCTTGG TGGCGACCGC
CGTTCGCTCG ACTACGGCGC CACGCAGTGC CTGGTGCTCG GGGCCGAGGT CGCGTGCCTC
GGCACGGTGG TCGGGGCGAG CGCCGACGCG CCCTACCTCG CGATTCATCT CGACCTGCCG
CCCGATGTGC TGGTCAAGTC TTTCGTCGCG CTCGCGGAAA GCGGCACGCT GGCGGCCGAG
CCTGCGCGCG TGACCGAGAA CTTCACGGCC CCGGTGGCGC TGGAAGTGGT CGAAGCCTTC
GCCCGCCTGC TGCAGGCGGC CGACGACCCG GTGGACCGGC GCACGCTCGC GCCGCTGGCC
GTCGAGGAAA TCGTGCTGCG ACTGCTGCGT TCGGAGGCCG CGGCCGCCAT CCGCAGCGTA
GGCGCCGTCA CCAGGGCTGG CGCCCGCATA CAGGCGGCCA TCGCCTTCAT GCGCCGCCAC
CTGGGCCGGC CGCTGTCGGT GGCCGAGATC GCTGGCCACG TGCACATGAG CCCTTCGCAC
TTTGCGCACA GCTTTCGCGA AGTGGCCGGG GTCACACCGA TGCGCTGCAT CCGCGACCTG
CGCCTGGAAG AGGCGCGCGT GCTGATGCTG GGCGCCGGGC TGCGTCCCGG CGATGCGGCA
GCGAAGGTGG GATTCGAGAG CGCGGCGCAT TTCAACCGCG CGTTCCGCAG GCGGTTCGAG
GCGACGCCTG CCGAATATGT GCGGCGTGTG CAGTCGGGTT GA
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| Protein sequence | MPVPSVADNK PEVIPAAAWA RLRDMVAART SADGRTDALY PGLRCYRFSR PVRYEKTQRL
TPGVVVVLQG RKTAHLGGDR RSLDYGATQC LVLGAEVACL GTVVGASADA PYLAIHLDLP
PDVLVKSFVA LAESGTLAAE PARVTENFTA PVALEVVEAF ARLLQAADDP VDRRTLAPLA
VEEIVLRLLR SEAAAAIRSV GAVTRAGARI QAAIAFMRRH LGRPLSVAEI AGHVHMSPSH
FAHSFREVAG VTPMRCIRDL RLEEARVLML GAGLRPGDAA AKVGFESAAH FNRAFRRRFE
ATPAEYVRRV QSG
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