| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0883 |
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| Symbol | |
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| ID | 7972099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 971762 |
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| End bp | 972574 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791480 |
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| Product | protein of unknown function DUF81 |
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| Protein accession | YP_002942801 |
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| Protein GI | 239813891 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGA TCGGCTTCCT GGCAGGCGAC CATTCGCTTT CCATCCTGTG CATCCTTGCC
GGGGTCGCAT TCATTGCGGG GGCCTTCGAC GCCATCGCAG GTGGCGGCGG ATTGGTGACC
GTGCCCGCGC TGGTGATCGC GGGGCTCGAC CCGGTCTCGG CCATCGCAAC GAGCAAGCTG
CAAGCGACCC TGGGGGCGGT CTCCGCGACA ACGAGCTTCG GGCGCGCAGG CTTGATCGAG
TGGAGGCGGA TCTGGCCCGC GGCCCTCCTG GCTTGCGTGG GTTCGGTCCT TGGCGCGCTG
GCGGTCAGCT CGGTTCCGCA GCAGGTGGTG AAGACCGGTT TGCCCTTTCT CCTGATTGCC
ATGGCGCTGT ATTTCGCCCT GTCGCCCAAG ATGACCGACG AGGACGCCGG GCAGAGAATT
TCGATGGCGG CCTTCTGCGC GACTGCCGCG GTCGTGATCG GGTTCTACGA CGGGGCCTTC
GGTCCGGGCA CCGGCTCCTT CTTCATGATC GCGTTCGTCC TGCTGCTGGG CTGGGGCGTG
GTACGCGCCA CAGCGCACAC CAAGCTGCTC AACCTGGCGT CGATCCTGGG GTCGCTTTCC
ATCTACCTCT TTCACGGGCT TGTGCACTGG CGCATCGGCG TGGTGATGGG CCTGGGAGCA
TTCATCGGTG CGCTGGTGGG GTCCAGGTTG GCAATCCGTG CCGGCGCCAG GCTCATCCGG
CCGCTGCTCA TGGTGGTTTG CTGCGCCATT GCCTTCAAGC TGATGCTGGC TCCGGCGCAC
CCCGTCCATC AGTGGCTTGC GGGCAGGATG TGA
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| Protein sequence | MDMIGFLAGD HSLSILCILA GVAFIAGAFD AIAGGGGLVT VPALVIAGLD PVSAIATSKL
QATLGAVSAT TSFGRAGLIE WRRIWPAALL ACVGSVLGAL AVSSVPQQVV KTGLPFLLIA
MALYFALSPK MTDEDAGQRI SMAAFCATAA VVIGFYDGAF GPGTGSFFMI AFVLLLGWGV
VRATAHTKLL NLASILGSLS IYLFHGLVHW RIGVVMGLGA FIGALVGSRL AIRAGARLIR
PLLMVVCCAI AFKLMLAPAH PVHQWLAGRM
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