| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0864 |
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| Symbol | |
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| ID | 7972079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 950285 |
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| End bp | 951925 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791462 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002942783 |
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| Protein GI | 239813873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAA TTTCCGAACT CAAACTCCCG CTGGACCACG CCCCCGAGGC GCTGGCCGCT
CTGATCGCCC GGACGCTGGA CGTCCCGTTC GAAGCGATCG CTTCCCACAC CGTCTTCAAG
CGCAGCTTCG ACGCGCGCAA GGCCGACCTG CTCACGGTCT ACATCGCCGA CGTGCAGCTG
GCCGACGCCG GGCTCGAAGC CGCACTGCTC GCGAAGCACG CTGCGCATCC GCACATCCAG
GCCGCGCCCG ACATGCGCTA CACGCCGCCC GCGCAGGCAC CCGAAGGCGC GCCCCGGCCG
GTGGTGATCG GCTTCGGCCC CTGCGGCATC TTTGCGGCGC TGATGCTCGC GAAGATGGGG
TTCAAGCCCA TCGTGCTCGA ACGCGGCAAG ACCGTGCGCC AGCGCACCCG CGACACCTGG
GGCCTGTGGC GCAAGAGCGT GCTCGACCCC GAGTCGAATG TGCAGTTCGG CGAAGGCGGC
GCCGGCACCT TCTCGGACGG CAAGCTCTAC AGCCAGATCA AGGACCCGCG CTTCCTCGGC
CGCAAGGTGA TGGAAGAGTT CGTGAAGGCC GGCGCGCCGC CAGAGATCCT TTATGTCGCG
CATCCGCACA TCGGCACCTT CAAGCTGGTG AAGGTGGTGG AAAACATCCG CGAGCAGATC
GTCTCGCTGG GCGGCGAGAT CCGCTTCGAG CAGCGCGTGA CCGACGTGCA GATCGAGAAC
GGCCAGCTTC GCGGCCTCAC CGTGCTCGAC CAGGCGACCG GCACGAGCAG CGAGCTGCGC
GCCGACCATG TGGTGATGGC GCTCGGCCAC AGCTCGCGCG ACACTTTTTC CATGCTGCAC
GCGCGCGGCG TGCACATCGA GGCCAAGCCC TTTTCCATCG GCTTTCGCGT CGAGCATCCG
CAGGGCCTGA TCGACCGCGC GCGCTGGGGC CGCCATGCGG GCCATCCGCT GCTCGGCGCG
GCCGACTACA AGCTGGTGCA CCACGCGAGC AACGGCCGCT CGGTCTACAG CTTCTGCATG
TGCCCGGGCG GCACCGTGGT CGCGGCCACC AGCGAGCCCG GCCGCGTGGT CACCAACGGC
ATGAGCCAGT ATTCGCGCAA CGAACGCAAT GCCAACGCGG GCATCGTGGT GGGCATCGAC
CCGCGCGACT TTCCCGGCTG GACGCCCGAG ACCGCGGGCG ATGCGCTCGC CGGCATCGCG
CTGCAGCGCG AACTCGAGTC GAACGCCTTC GTGCTCGGCG GCGGCGACTA CCGCGCGCCC
GGCCAGCTGG TGGGCGACTT CATCGCGGGC AAGCCCTCGA CCGCGCTCGG CAGCGTGACG
CCCTCGTACA AGCCCGGCGT CACGCCCACT GACCTGCACC AGGCGCTGCC GGCCTACGCC
ATCGAGGCGA TGCGCGAGGC CTTTCCCGCC TTCGGCCGCA AGATCAAGGG CTTCGACCTG
CACGATGCGG TGCTCACCGG CGTGGAAACG CGCACCTCGT CGCCGATCCG CATCACGCGC
GGCGACGACT TCCAGAGCCT CAACGTGCGC GGCCTCTACC CCGCCGGCGA AGGCGCGAGC
TACGCGGGCG GCATCCTGTC GGCTGGCGTC GACGGCATCA AGGTGGCCGA AGCGGTGGCG
CGCAGCGTCG CCGGAACATG A
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| Protein sequence | MLRISELKLP LDHAPEALAA LIARTLDVPF EAIASHTVFK RSFDARKADL LTVYIADVQL
ADAGLEAALL AKHAAHPHIQ AAPDMRYTPP AQAPEGAPRP VVIGFGPCGI FAALMLAKMG
FKPIVLERGK TVRQRTRDTW GLWRKSVLDP ESNVQFGEGG AGTFSDGKLY SQIKDPRFLG
RKVMEEFVKA GAPPEILYVA HPHIGTFKLV KVVENIREQI VSLGGEIRFE QRVTDVQIEN
GQLRGLTVLD QATGTSSELR ADHVVMALGH SSRDTFSMLH ARGVHIEAKP FSIGFRVEHP
QGLIDRARWG RHAGHPLLGA ADYKLVHHAS NGRSVYSFCM CPGGTVVAAT SEPGRVVTNG
MSQYSRNERN ANAGIVVGID PRDFPGWTPE TAGDALAGIA LQRELESNAF VLGGGDYRAP
GQLVGDFIAG KPSTALGSVT PSYKPGVTPT DLHQALPAYA IEAMREAFPA FGRKIKGFDL
HDAVLTGVET RTSSPIRITR GDDFQSLNVR GLYPAGEGAS YAGGILSAGV DGIKVAEAVA
RSVAGT
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